RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 RAB3GAP2Q9H2M9 1393 aa12.41□□□□□ -0.42
AP3D1-208ENST00000590683 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
AP3D1-208ENST00000590683 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
AP3D1-208ENST00000590683 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
AP3D1-208ENST00000590683 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
AP3D1-208ENST00000590683 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
AP3D1-208ENST00000590683 TTLL6Q8N841 843 aa12.4□□□□□ -0.42
AP3D1-208ENST00000590683 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
AP3D1-208ENST00000590683 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
AP3D1-208ENST00000590683 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
AP3D1-208ENST00000590683 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
AP3D1-208ENST00000590683 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
AP3D1-208ENST00000590683 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
AP3D1-208ENST00000590683 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
AP3D1-208ENST00000590683 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
AP3D1-208ENST00000590683 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
AP3D1-208ENST00000590683 TM4SF1P30408 202 aa12.38□□□□□ -0.43
AP3D1-208ENST00000590683 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
AP3D1-208ENST00000590683 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
AP3D1-208ENST00000590683 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
AP3D1-208ENST00000590683 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
AP3D1-208ENST00000590683 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
AP3D1-208ENST00000590683 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
AP3D1-208ENST00000590683 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
AP3D1-208ENST00000590683 COG3Q96JB2 828 aa12.37□□□□□ -0.43
AP3D1-208ENST00000590683 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
AP3D1-208ENST00000590683 AOC2O75106 756 aa12.36□□□□□ -0.43
AP3D1-208ENST00000590683 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
AP3D1-208ENST00000590683 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
AP3D1-208ENST00000590683 TJP1Q07157 1748 aa12.36□□□□□ -0.43
AP3D1-208ENST00000590683 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
AP3D1-208ENST00000590683 C21orf2O43822 256 aa12.35□□□□□ -0.43
AP3D1-208ENST00000590683 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP3D1-208ENST00000590683 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
AP3D1-208ENST00000590683 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
AP3D1-208ENST00000590683 ECE1P42892 770 aa12.34□□□□□ -0.43
AP3D1-208ENST00000590683 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
AP3D1-208ENST00000590683 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
AP3D1-208ENST00000590683 USPL1Q5W0Q7 1092 aa12.33□□□□□ -0.44
AP3D1-208ENST00000590683 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
AP3D1-208ENST00000590683 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
AP3D1-208ENST00000590683 INSRP06213 1382 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 H0YIN7 160 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 PHKG2P15735 406 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 EPHX2P34913 555 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 NFIXQ14938 502 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
AP3D1-208ENST00000590683 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
AP3D1-208ENST00000590683 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
AP3D1-208ENST00000590683 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.441e-9■□□□□ 9.9
AP3D1-208ENST00000590683 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
AP3D1-208ENST00000590683 ZNF541Q9H0D2 1346 aa12.31□□□□□ -0.44
AP3D1-208ENST00000590683 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
AP3D1-208ENST00000590683 MAP2K2P36507 400 aa12.3□□□□□ -0.44
AP3D1-208ENST00000590683 ARFGEF2Q9Y6D5 1785 aa12.3□□□□□ -0.44
AP3D1-208ENST00000590683 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 CA12O43570 354 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 SERPINB2P05120 415 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 RNF123Q5XPI4 1314 aa12.29□□□□□ -0.44
AP3D1-208ENST00000590683 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
AP3D1-208ENST00000590683 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
AP3D1-208ENST00000590683 ZPR1O75312 459 aa12.28□□□□□ -0.44
AP3D1-208ENST00000590683 CST9Q5W186 159 aa12.28□□□□□ -0.44
AP3D1-208ENST00000590683 FLT4P35916 1363 aa12.28□□□□□ -0.44
AP3D1-208ENST00000590683 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
AP3D1-208ENST00000590683 PNMA8AQ86V59 439 aaPredicted RBP12.27□□□□□ -0.45
AP3D1-208ENST00000590683 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
AP3D1-208ENST00000590683 TRAF5O00463 557 aa12.26□□□□□ -0.45
AP3D1-208ENST00000590683 BRPF1P55201 1214 aaPredicted RBP12.26□□□□□ -0.45
AP3D1-208ENST00000590683 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
AP3D1-208ENST00000590683 GGNBP2Q9H3C7 697 aa12.26□□□□□ -0.45
AP3D1-208ENST00000590683 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
AP3D1-208ENST00000590683 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
AP3D1-208ENST00000590683 DLL1O00548 723 aa12.25□□□□□ -0.45
AP3D1-208ENST00000590683 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
AP3D1-208ENST00000590683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
AP3D1-208ENST00000590683 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
AP3D1-208ENST00000590683 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
AP3D1-208ENST00000590683 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
AP3D1-208ENST00000590683 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
AP3D1-208ENST00000590683 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
AP3D1-208ENST00000590683 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
AP3D1-208ENST00000590683 FXR1P51114 621 aaKnown RBP eCLIP12.23□□□□□ -0.45
AP3D1-208ENST00000590683 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
AP3D1-208ENST00000590683 BICDL1Q6ZP65 573 aa12.23□□□□□ -0.45
AP3D1-208ENST00000590683 ZIC5Q96T25 663 aa12.23□□□□□ -0.45
AP3D1-208ENST00000590683 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
AP3D1-208ENST00000590683 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
AP3D1-208ENST00000590683 AKAP11Q9UKA4 1901 aa12.22□□□□□ -0.45
AP3D1-208ENST00000590683 FYB1O15117 783 aa12.22□□□□□ -0.45
AP3D1-208ENST00000590683 PRPF40BQ6NWY9 871 aaKnown RBP12.22□□□□□ -0.45
AP3D1-208ENST00000590683 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
AP3D1-208ENST00000590683 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
AP3D1-208ENST00000590683 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
AP3D1-208ENST00000590683 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.45
AP3D1-208ENST00000590683 COL15A1P39059 1388 aa12.21□□□□□ -0.45
AP3D1-208ENST00000590683 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
AP3D1-208ENST00000590683 CABP4P57796 275 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms