RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 DNAJC10Q8IXB1 793 aa17.67■□□□□ 0.42
PRKCSH-210ENST00000589990 NFKBIEO00221 500 aa17.66■□□□□ 0.42
PRKCSH-210ENST00000589990 LMNB1P20700 586 aa17.66■□□□□ 0.42
PRKCSH-210ENST00000589990 NFIXQ14938 502 aa17.66■□□□□ 0.42
PRKCSH-210ENST00000589990 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-210ENST00000589990 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
PRKCSH-210ENST00000589990 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
PRKCSH-210ENST00000589990 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-210ENST00000589990 ZPR1O75312 459 aa17.63■□□□□ 0.41
PRKCSH-210ENST00000589990 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
PRKCSH-210ENST00000589990 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
PRKCSH-210ENST00000589990 POTEIP0CG38 1075 aa17.62■□□□□ 0.41
PRKCSH-210ENST00000589990 POTEJP0CG39 1038 aa17.62■□□□□ 0.41
PRKCSH-210ENST00000589990 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
PRKCSH-210ENST00000589990 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
PRKCSH-210ENST00000589990 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
PRKCSH-210ENST00000589990 SERPINB2P05120 415 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 CYP19A1P11511 503 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 COL15A1P39059 1388 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
PRKCSH-210ENST00000589990 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
PRKCSH-210ENST00000589990 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-210ENST00000589990 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
PRKCSH-210ENST00000589990 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-210ENST00000589990 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
PRKCSH-210ENST00000589990 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.41
PRKCSH-210ENST00000589990 FOXN1O15353 648 aa17.57■□□□□ 0.4
PRKCSH-210ENST00000589990 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
PRKCSH-210ENST00000589990 SLC52A2Q9HAB3 445 aa17.57■□□□□ 0.4
PRKCSH-210ENST00000589990 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-210ENST00000589990 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
PRKCSH-210ENST00000589990 MRC1P22897 1456 aa17.56■□□□□ 0.4
PRKCSH-210ENST00000589990 H0YIN7 160 aa17.55■□□□□ 0.4
PRKCSH-210ENST00000589990 C21orf2O43822 256 aa17.55■□□□□ 0.4
PRKCSH-210ENST00000589990 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 IL13P35225 146 aa17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 ERFEQ4G0M1 354 aa17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 PANK3Q9H999 370 aa17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
PRKCSH-210ENST00000589990 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
PRKCSH-210ENST00000589990 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
PRKCSH-210ENST00000589990 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
PRKCSH-210ENST00000589990 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
PRKCSH-210ENST00000589990 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.47e-13■□□□□ 10.2
PRKCSH-210ENST00000589990 RNMTO43148 476 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-210ENST00000589990 DPY19L2Q6NUT2 758 aa17.52■□□□□ 0.4
PRKCSH-210ENST00000589990 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.4
PRKCSH-210ENST00000589990 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
PRKCSH-210ENST00000589990 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
PRKCSH-210ENST00000589990 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
PRKCSH-210ENST00000589990 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
PRKCSH-210ENST00000589990 SCN7AQ01118 1682 aa17.5■□□□□ 0.39
PRKCSH-210ENST00000589990 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
PRKCSH-210ENST00000589990 HMOX1P09601 288 aa17.49■□□□□ 0.39
PRKCSH-210ENST00000589990 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-210ENST00000589990 VEGFBP49765 207 aa17.48■□□□□ 0.39
PRKCSH-210ENST00000589990 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-210ENST00000589990 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
PRKCSH-210ENST00000589990 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
PRKCSH-210ENST00000589990 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
PRKCSH-210ENST00000589990 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
PRKCSH-210ENST00000589990 PRDM10Q9NQV6 1147 aa17.46■□□□□ 0.39
PRKCSH-210ENST00000589990 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-210ENST00000589990 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.38
PRKCSH-210ENST00000589990 PDE6BP35913 854 aa17.45■□□□□ 0.38
PRKCSH-210ENST00000589990 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-210ENST00000589990 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
PRKCSH-210ENST00000589990 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-210ENST00000589990 LBX1P52954 281 aa17.44■□□□□ 0.38
PRKCSH-210ENST00000589990 ZNF496Q96IT1 587 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-210ENST00000589990 TAF1DQ9H5J8 278 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-210ENST00000589990 SLC34A2O95436 690 aa17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
PRKCSH-210ENST00000589990 SCN4AP35499 1836 aa17.42■□□□□ 0.38
PRKCSH-210ENST00000589990 SRGNP10124 158 aa17.42■□□□□ 0.38
PRKCSH-210ENST00000589990 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
PRKCSH-210ENST00000589990 A0A087WZG4 1122 aa17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 STARD3NLO95772 234 aa17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 A1BGP04217 495 aa17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-210ENST00000589990 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 STYK1Q6J9G0 422 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms