RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
VAT1-207ENST00000589828 NFKBIEO00221 500 aa11.09□□□□□ -0.63
VAT1-207ENST00000589828 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
VAT1-207ENST00000589828 CABP4P57796 275 aa11.09□□□□□ -0.63
VAT1-207ENST00000589828 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
VAT1-207ENST00000589828 ARFGEF1Q9Y6D6 1849 aa11.08□□□□□ -0.64
VAT1-207ENST00000589828 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
VAT1-207ENST00000589828 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
VAT1-207ENST00000589828 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
VAT1-207ENST00000589828 HSP90AB1P08238 724 aaKnown RBP11.07□□□□□ -0.64
VAT1-207ENST00000589828 NFIXQ14938 502 aa11.07□□□□□ -0.64
VAT1-207ENST00000589828 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
VAT1-207ENST00000589828 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
VAT1-207ENST00000589828 PCNTO95613 3336 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 TTLL6Q8N841 843 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 BCL2L12Q9HB09 334 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
VAT1-207ENST00000589828 MYH14Q7Z406 1995 aaKnown RBP11.06□□□□□ -0.64
VAT1-207ENST00000589828 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
VAT1-207ENST00000589828 COL5A3P25940 1745 aaPredicted RBP11.05□□□□□ -0.64
VAT1-207ENST00000589828 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
VAT1-207ENST00000589828 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
VAT1-207ENST00000589828 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 CARMIL3Q8ND23 1372 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 ZPR1O75312 459 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 SERPINB2P05120 415 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
VAT1-207ENST00000589828 MTHFSP49914 203 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
VAT1-207ENST00000589828 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
VAT1-207ENST00000589828 CYP19A1P11511 503 aaPredicted RBP11.03□□□□□ -0.64
VAT1-207ENST00000589828 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
VAT1-207ENST00000589828 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
VAT1-207ENST00000589828 SBF1O95248 1867 aa11.03□□□□□ -0.64
VAT1-207ENST00000589828 DDNO94850 711 aaPredicted RBP11.02□□□□□ -0.65
VAT1-207ENST00000589828 VEGFBP49765 207 aa11.02□□□□□ -0.65
VAT1-207ENST00000589828 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
VAT1-207ENST00000589828 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
VAT1-207ENST00000589828 ZBTB1Q9Y2K1 713 aa11.02□□□□□ -0.65
VAT1-207ENST00000589828 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.65
VAT1-207ENST00000589828 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 C21orf2O43822 256 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 CTCFP49711 727 aaPredicted RBP11.01□□□□□ -0.65
VAT1-207ENST00000589828 LBX1P52954 281 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 WBP1LQ9NX94 342 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 PASKQ96RG2 1323 aa11.01□□□□□ -0.65
VAT1-207ENST00000589828 H0YIN7 160 aa11□□□□□ -0.65
VAT1-207ENST00000589828 SLC39A6Q13433 755 aa11□□□□□ -0.65
VAT1-207ENST00000589828 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
VAT1-207ENST00000589828 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
VAT1-207ENST00000589828 LGR6Q9HBX8 967 aa11□□□□□ -0.65
VAT1-207ENST00000589828 COL15A1P39059 1388 aa11□□□□□ -0.65
VAT1-207ENST00000589828 TJP1Q07157 1748 aa10.99□□□□□ -0.65
VAT1-207ENST00000589828 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
VAT1-207ENST00000589828 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
VAT1-207ENST00000589828 ZNF622Q969S3 477 aaKnown RBP eCLIP10.99□□□□□ -0.65
VAT1-207ENST00000589828 ABHD8Q96I13 439 aa10.99□□□□□ -0.65
VAT1-207ENST00000589828 HSPA8P11142 646 aaKnown RBP10.98□□□□□ -0.65
VAT1-207ENST00000589828 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
VAT1-207ENST00000589828 SLC52A2Q9HAB3 445 aa10.98□□□□□ -0.65
VAT1-207ENST00000589828 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 SULT6B1Q6IMI4 303 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 LDHDQ86WU2 507 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 TAF1DQ9H5J8 278 aaPredicted RBP10.97□□□□□ -0.65
VAT1-207ENST00000589828 LTBP3Q9NS15 1303 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
VAT1-207ENST00000589828 RNMTO43148 476 aaKnown RBP10.96□□□□□ -0.65
VAT1-207ENST00000589828 CANXP27824 592 aaKnown RBP10.96□□□□□ -0.65
VAT1-207ENST00000589828 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.65
VAT1-207ENST00000589828 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
VAT1-207ENST00000589828 BRIP1Q9BX63 1249 aa10.96□□□□□ -0.65
VAT1-207ENST00000589828 TAOK3Q9H2K8 898 aa10.96□□□□□ -0.65
VAT1-207ENST00000589828 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
VAT1-207ENST00000589828 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
VAT1-207ENST00000589828 AKAP4Q5JQC9 854 aa10.95□□□□□ -0.66
VAT1-207ENST00000589828 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
VAT1-207ENST00000589828 IL13P35225 146 aa10.94□□□□□ -0.66
VAT1-207ENST00000589828 PDE6BP35913 854 aa10.94□□□□□ -0.66
VAT1-207ENST00000589828 EAPPQ56P03 285 aaPredicted RBP10.94□□□□□ -0.66
VAT1-207ENST00000589828 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
VAT1-207ENST00000589828 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
VAT1-207ENST00000589828 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
VAT1-207ENST00000589828 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
VAT1-207ENST00000589828 DEFB115Q30KQ5 88 aa10.93□□□□□ -0.66
VAT1-207ENST00000589828 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
VAT1-207ENST00000589828 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
VAT1-207ENST00000589828 SRGNP10124 158 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 RGS19P49795 217 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 MAP1SQ66K74 1059 aaPredicted RBP10.92□□□□□ -0.66
VAT1-207ENST00000589828 STYK1Q6J9G0 422 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 POLR3GLQ9BT43 218 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms