RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 FMNL2Q96PY5 1086 aa20.46■□□□□ 0.87
GCDH-208ENST00000588905 TEX13AQ9BXU3 409 aaPredicted RBP20.46■□□□□ 0.87
GCDH-208ENST00000588905 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
GCDH-208ENST00000588905 ADCY9O60503 1353 aa20.46■□□□□ 0.87
GCDH-208ENST00000588905 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
GCDH-208ENST00000588905 CCDC184Q52MB2 194 aa20.45■□□□□ 0.86
GCDH-208ENST00000588905 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
GCDH-208ENST00000588905 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
GCDH-208ENST00000588905 ANP32CO43423 234 aa20.44■□□□□ 0.86
GCDH-208ENST00000588905 KCNQ3O43525 872 aa20.44■□□□□ 0.86
GCDH-208ENST00000588905 GYS1P13807 737 aa20.44■□□□□ 0.86
GCDH-208ENST00000588905 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
GCDH-208ENST00000588905 MMP10P09238 476 aa20.43■□□□□ 0.86
GCDH-208ENST00000588905 C1QTNF8P60827 252 aa20.43■□□□□ 0.86
GCDH-208ENST00000588905 TAF7Q15545 349 aaPredicted RBP20.43■□□□□ 0.86
GCDH-208ENST00000588905 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
GCDH-208ENST00000588905 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
GCDH-208ENST00000588905 ATP10DQ9P241 1426 aa20.43■□□□□ 0.86
GCDH-208ENST00000588905 GRIN3BO60391 1043 aa20.42■□□□□ 0.86
GCDH-208ENST00000588905 WWC3Q9ULE0 1092 aa20.42■□□□□ 0.86
GCDH-208ENST00000588905 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
GCDH-208ENST00000588905 C10orf71Q711Q0 1435 aa20.42■□□□□ 0.86
GCDH-208ENST00000588905 SRP68Q9UHB9 627 aaKnown RBP20.41■□□□□ 0.86
GCDH-208ENST00000588905 USP42Q9H9J4 1324 aaKnown RBP20.41■□□□□ 0.86
GCDH-208ENST00000588905 SIPA1L3O60292 1781 aaPredicted RBP20.4■□□□□ 0.86
GCDH-208ENST00000588905 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
GCDH-208ENST00000588905 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
GCDH-208ENST00000588905 ARFGEF1Q9Y6D6 1849 aa20.4■□□□□ 0.86
GCDH-208ENST00000588905 ZPR1O75312 459 aa20.39■□□□□ 0.85
GCDH-208ENST00000588905 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
GCDH-208ENST00000588905 RIPK4P57078 832 aa20.39■□□□□ 0.85
GCDH-208ENST00000588905 PNISRQ8TF01 805 aaKnown RBP20.39■□□□□ 0.85
GCDH-208ENST00000588905 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
GCDH-208ENST00000588905 FKBP8Q14318 412 aa20.38■□□□□ 0.85
GCDH-208ENST00000588905 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
GCDH-208ENST00000588905 COL15A1P39059 1388 aa20.37■□□□□ 0.85
GCDH-208ENST00000588905 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
GCDH-208ENST00000588905 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
GCDH-208ENST00000588905 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
GCDH-208ENST00000588905 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
GCDH-208ENST00000588905 RRP7AQ9Y3A4 280 aaKnown RBP20.37■□□□□ 0.85
GCDH-208ENST00000588905 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
GCDH-208ENST00000588905 A0A087WZG4 1122 aa20.36■□□□□ 0.85
GCDH-208ENST00000588905 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
GCDH-208ENST00000588905 USP16Q9Y5T5 823 aa20.36■□□□□ 0.85
GCDH-208ENST00000588905 SENP3-EIF4A1A0A087X0R7 540 aa20.35■□□□□ 0.85
GCDH-208ENST00000588905 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
GCDH-208ENST00000588905 A1BGP04217 495 aa20.35■□□□□ 0.85
GCDH-208ENST00000588905 IL6STP40189 918 aaPredicted RBP20.34■□□□□ 0.85
GCDH-208ENST00000588905 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
GCDH-208ENST00000588905 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
GCDH-208ENST00000588905 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.85
GCDH-208ENST00000588905 CEP350Q5VT06 3117 aa20.33■□□□□ 0.85
GCDH-208ENST00000588905 TM4SF1P30408 202 aa20.33■□□□□ 0.85
GCDH-208ENST00000588905 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
GCDH-208ENST00000588905 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
GCDH-208ENST00000588905 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
GCDH-208ENST00000588905 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
GCDH-208ENST00000588905 DLEC1Q9Y238 1755 aa20.31■□□□□ 0.84
GCDH-208ENST00000588905 DDR1Q08345 913 aa20.31■□□□□ 0.84
GCDH-208ENST00000588905 BCL2L12Q9HB09 334 aa20.31■□□□□ 0.84
GCDH-208ENST00000588905 ZNF330Q9Y3S2 320 aaPredicted RBP20.31■□□□□ 0.84
GCDH-208ENST00000588905 APAF1O14727 1248 aa20.3■□□□□ 0.84
GCDH-208ENST00000588905 EIF4A1P60842 406 aaKnown RBP20.3■□□□□ 0.84
GCDH-208ENST00000588905 TGFB2P61812 414 aa20.3■□□□□ 0.84
GCDH-208ENST00000588905 SBF1O95248 1867 aa20.3■□□□□ 0.84
GCDH-208ENST00000588905 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
GCDH-208ENST00000588905 NFIXQ14938 502 aa20.29■□□□□ 0.84
GCDH-208ENST00000588905 BABAM1Q9NWV8 329 aa20.29■□□□□ 0.84
GCDH-208ENST00000588905 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
GCDH-208ENST00000588905 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
GCDH-208ENST00000588905 A0A0G2JLW4 131 aa20.28■□□□□ 0.84
GCDH-208ENST00000588905 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
GCDH-208ENST00000588905 KCNA3P22001 575 aa20.27■□□□□ 0.84
GCDH-208ENST00000588905 PIP4K2AP48426 406 aaPredicted RBP20.27■□□□□ 0.84
GCDH-208ENST00000588905 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
GCDH-208ENST00000588905 DPEP1P16444 411 aa20.26■□□□□ 0.83
GCDH-208ENST00000588905 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
GCDH-208ENST00000588905 ZNF526Q8TF50 670 aaPredicted RBP20.26■□□□□ 0.83
GCDH-208ENST00000588905 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
GCDH-208ENST00000588905 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
GCDH-208ENST00000588905 CAMTA2O94983 1202 aa20.25■□□□□ 0.83
GCDH-208ENST00000588905 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
GCDH-208ENST00000588905 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
GCDH-208ENST00000588905 SERPINB2P05120 415 aa20.24■□□□□ 0.83
GCDH-208ENST00000588905 CHL1O00533 1208 aa20.23■□□□□ 0.83
GCDH-208ENST00000588905 TBC1D9BQ66K14 1250 aa20.23■□□□□ 0.83
GCDH-208ENST00000588905 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
GCDH-208ENST00000588905 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
GCDH-208ENST00000588905 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
GCDH-208ENST00000588905 KIF3CO14782 793 aa20.21■□□□□ 0.83
GCDH-208ENST00000588905 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
GCDH-208ENST00000588905 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
GCDH-208ENST00000588905 CCDC88AQ3V6T2 1871 aa20.21■□□□□ 0.83
GCDH-208ENST00000588905 COL11A2P13942 1736 aaPredicted RBP20.21■□□□□ 0.83
GCDH-208ENST00000588905 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
GCDH-208ENST00000588905 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
GCDH-208ENST00000588905 KDM3BQ7LBC6 1761 aa20.2■□□□□ 0.82
GCDH-208ENST00000588905 RGL2O15211 777 aa20.19■□□□□ 0.82
GCDH-208ENST00000588905 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms