RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 UBR2Q8IWV8 1755 aa13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
NEDD4L-224ENST00000588712 ABCC4O15439 1325 aa13.4□□□□□ -0.26
NEDD4L-224ENST00000588712 KAT6BQ8WYB5 2073 aa13.4□□□□□ -0.26
NEDD4L-224ENST00000588712 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
NEDD4L-224ENST00000588712 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
NEDD4L-224ENST00000588712 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
NEDD4L-224ENST00000588712 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.27
NEDD4L-224ENST00000588712 STARD3NLO95772 234 aa13.4□□□□□ -0.27
NEDD4L-224ENST00000588712 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.27
NEDD4L-224ENST00000588712 NECTIN2Q92692 538 aa13.4□□□□□ -0.27
NEDD4L-224ENST00000588712 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.27
NEDD4L-224ENST00000588712 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
NEDD4L-224ENST00000588712 RLBP1P12271 317 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 RXRBP28702 533 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-224ENST00000588712 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
NEDD4L-224ENST00000588712 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
NEDD4L-224ENST00000588712 PRAMEF22A3QJZ6 481 aa13.36□□□□□ -0.27
NEDD4L-224ENST00000588712 G2E3Q7L622 706 aa13.36□□□□□ -0.27
NEDD4L-224ENST00000588712 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 PDIA6Q15084 440 aa13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 C5P01031 1676 aa13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
NEDD4L-224ENST00000588712 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 HDAC5Q9UQL6 1122 aa13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 RGS12O14924 1447 aa13.34□□□□□ -0.27
NEDD4L-224ENST00000588712 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.27
NEDD4L-224ENST00000588712 KCNQ2O43526 872 aa13.33□□□□□ -0.27
NEDD4L-224ENST00000588712 SIK1P57059 783 aa13.33□□□□□ -0.27
NEDD4L-224ENST00000588712 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.27
NEDD4L-224ENST00000588712 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 MYL6BP14649 208 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
NEDD4L-224ENST00000588712 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 SRCIN1Q9C0H9 1055 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 GNAI3P08754 354 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 CYP19A1P11511 503 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 RWDD1Q9H446 243 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-224ENST00000588712 F6X3S4 739 aa13.31□□□□□ -0.28
NEDD4L-224ENST00000588712 ANXA1P04083 346 aa13.31□□□□□ -0.28
NEDD4L-224ENST00000588712 PLBD2Q8NHP8 589 aa13.31□□□□□ -0.28
NEDD4L-224ENST00000588712 XAGE3Q8WTP9 111 aa13.31□□□□□ -0.28
NEDD4L-224ENST00000588712 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-224ENST00000588712 A1BGP04217 495 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
NEDD4L-224ENST00000588712 ADCY9O60503 1353 aa13.29□□□□□ -0.28
NEDD4L-224ENST00000588712 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
NEDD4L-224ENST00000588712 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
NEDD4L-224ENST00000588712 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 METTL22Q9BUU2 404 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 SBF2Q86WG5 1849 aa13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-224ENST00000588712 BTAF1O14981 1849 aa13.27□□□□□ -0.28
NEDD4L-224ENST00000588712 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
NEDD4L-224ENST00000588712 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.28
NEDD4L-224ENST00000588712 N4BP2Q86UW6 1770 aaPredicted RBP13.27□□□□□ -0.28
NEDD4L-224ENST00000588712 A0A087WZG4 1122 aa13.27□□□□□ -0.29
NEDD4L-224ENST00000588712 GNAI2P04899 355 aa13.27□□□□□ -0.29
NEDD4L-224ENST00000588712 RC3H1Q5TC82 1133 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1511.1 ms