RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
GGA3-219ENST00000584550 FOXN1O15353 648 aa14.06□□□□□ -0.16
GGA3-219ENST00000584550 CDCA8Q53HL2 280 aa14.06□□□□□ -0.16
GGA3-219ENST00000584550 TTLL6Q8N841 843 aa14.06□□□□□ -0.16
GGA3-219ENST00000584550 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
GGA3-219ENST00000584550 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
GGA3-219ENST00000584550 TJP1Q07157 1748 aa14.05□□□□□ -0.16
GGA3-219ENST00000584550 NFKBIEO00221 500 aa14.05□□□□□ -0.16
GGA3-219ENST00000584550 NFIXQ14938 502 aa14.05□□□□□ -0.16
GGA3-219ENST00000584550 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
GGA3-219ENST00000584550 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
GGA3-219ENST00000584550 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
GGA3-219ENST00000584550 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
GGA3-219ENST00000584550 C1orf141Q5JVX7 400 aa14.04□□□□□ -0.16
GGA3-219ENST00000584550 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
GGA3-219ENST00000584550 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
GGA3-219ENST00000584550 H0YIN7 160 aa14.03□□□□□ -0.16
GGA3-219ENST00000584550 SERPINB2P05120 415 aa14.03□□□□□ -0.16
GGA3-219ENST00000584550 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
GGA3-219ENST00000584550 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
GGA3-219ENST00000584550 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
GGA3-219ENST00000584550 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.17
GGA3-219ENST00000584550 BICDL1Q6ZP65 573 aa14.02□□□□□ -0.17
GGA3-219ENST00000584550 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
GGA3-219ENST00000584550 ZNF622Q969S3 477 aaKnown RBP eCLIP14.02□□□□□ -0.17
GGA3-219ENST00000584550 POLR3GLQ9BT43 218 aa14.02□□□□□ -0.17
GGA3-219ENST00000584550 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
GGA3-219ENST00000584550 CARMIL3Q8ND23 1372 aa14.01□□□□□ -0.17
GGA3-219ENST00000584550 SOS1Q07889 1333 aaPredicted RBP14.01□□□□□ -0.17
GGA3-219ENST00000584550 C21orf2O43822 256 aa14.01□□□□□ -0.17
GGA3-219ENST00000584550 SLC34A2O95436 690 aa14.01□□□□□ -0.17
GGA3-219ENST00000584550 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
GGA3-219ENST00000584550 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
GGA3-219ENST00000584550 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
GGA3-219ENST00000584550 AIDAQ96BJ3 306 aa14□□□□□ -0.17
GGA3-219ENST00000584550 BCL2L12Q9HB09 334 aa14□□□□□ -0.17
GGA3-219ENST00000584550 NRXN2Q9P2S2 1712 aa13.99□□□□□ -0.17
GGA3-219ENST00000584550 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
GGA3-219ENST00000584550 LBX1P52954 281 aa13.99□□□□□ -0.17
GGA3-219ENST00000584550 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
GGA3-219ENST00000584550 PRDM10Q9NQV6 1147 aa13.99□□□□□ -0.17
GGA3-219ENST00000584550 COL15A1P39059 1388 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 CNTNAP1P78357 1384 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
GGA3-219ENST00000584550 VEGFBP49765 207 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
GGA3-219ENST00000584550 CANXP27824 592 aaKnown RBP13.97□□□□□ -0.17
GGA3-219ENST00000584550 LGR6Q9HBX8 967 aa13.97□□□□□ -0.17
GGA3-219ENST00000584550 DICER1Q9UPY3 1922 aaKnown RBP13.97□□□□□ -0.17
GGA3-219ENST00000584550 SCN11AQ9UI33 1791 aa13.96□□□□□ -0.18
GGA3-219ENST00000584550 TBC1D9BQ66K14 1250 aa13.95□□□□□ -0.18
GGA3-219ENST00000584550 SLC52A2Q9HAB3 445 aa13.95□□□□□ -0.18
GGA3-219ENST00000584550 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
GGA3-219ENST00000584550 PASKQ96RG2 1323 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 EAPPQ56P03 285 aaPredicted RBP13.94□□□□□ -0.18
GGA3-219ENST00000584550 ANKRD31Q8N7Z5 1873 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 ABHD8Q96I13 439 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
GGA3-219ENST00000584550 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 PDE6BP35913 854 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 WBP1LQ9NX94 342 aa13.93□□□□□ -0.18
GGA3-219ENST00000584550 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
GGA3-219ENST00000584550 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
GGA3-219ENST00000584550 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
GGA3-219ENST00000584550 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
GGA3-219ENST00000584550 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 CCDC85CA6NKD9 419 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 NPHP1O15259 732 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 ITGBL1O95965 494 aaPredicted RBP13.91□□□□□ -0.18
GGA3-219ENST00000584550 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
GGA3-219ENST00000584550 PRR5LQ6MZQ0 368 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
GGA3-219ENST00000584550 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
GGA3-219ENST00000584550 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
GGA3-219ENST00000584550 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
GGA3-219ENST00000584550 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
GGA3-219ENST00000584550 LTBP3Q9NS15 1303 aa13.9□□□□□ -0.19
GGA3-219ENST00000584550 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
GGA3-219ENST00000584550 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
GGA3-219ENST00000584550 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
GGA3-219ENST00000584550 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
GGA3-219ENST00000584550 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
GGA3-219ENST00000584550 PANK3Q9H999 370 aa13.89□□□□□ -0.19
GGA3-219ENST00000584550 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
GGA3-219ENST00000584550 SCN4AP35499 1836 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 A0A087WZG4 1122 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 STARD3NLO95772 234 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 HMOX1P09601 288 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 IL13P35225 146 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 MLLT1Q03111 559 aaPredicted RBP13.88□□□□□ -0.19
GGA3-219ENST00000584550 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
GGA3-219ENST00000584550 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms