RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
CBX1-206ENST00000581003 COL15A1P39059 1388 aa16.71■□□□□ 0.27
CBX1-206ENST00000581003 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
CBX1-206ENST00000581003 DDR1Q08345 913 aa16.7■□□□□ 0.26
CBX1-206ENST00000581003 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
CBX1-206ENST00000581003 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
CBX1-206ENST00000581003 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
CBX1-206ENST00000581003 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
CBX1-206ENST00000581003 A1BGP04217 495 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 GPR162Q16538 588 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 C10orf71Q711Q0 1435 aa16.68■□□□□ 0.26
CBX1-206ENST00000581003 PXDNLA1KZ92 1463 aa16.67■□□□□ 0.26
CBX1-206ENST00000581003 YY1P25490 414 aa16.67■□□□□ 0.26
CBX1-206ENST00000581003 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
CBX1-206ENST00000581003 ZNF330Q9Y3S2 320 aaPredicted RBP16.67■□□□□ 0.26
CBX1-206ENST00000581003 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
CBX1-206ENST00000581003 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
CBX1-206ENST00000581003 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
CBX1-206ENST00000581003 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
CBX1-206ENST00000581003 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
CBX1-206ENST00000581003 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
CBX1-206ENST00000581003 NEFMP07197 916 aa16.65■□□□□ 0.26
CBX1-206ENST00000581003 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
CBX1-206ENST00000581003 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
CBX1-206ENST00000581003 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
CBX1-206ENST00000581003 STARD3NLO95772 234 aa16.64■□□□□ 0.25
CBX1-206ENST00000581003 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
CBX1-206ENST00000581003 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
CBX1-206ENST00000581003 ZPR1O75312 459 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
CBX1-206ENST00000581003 RIPK4P57078 832 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 NFIXQ14938 502 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
CBX1-206ENST00000581003 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
CBX1-206ENST00000581003 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 TM4SF1P30408 202 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
CBX1-206ENST00000581003 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
CBX1-206ENST00000581003 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
CBX1-206ENST00000581003 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
CBX1-206ENST00000581003 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
CBX1-206ENST00000581003 DPEP1P16444 411 aa16.6■□□□□ 0.25
CBX1-206ENST00000581003 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
CBX1-206ENST00000581003 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
CBX1-206ENST00000581003 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
CBX1-206ENST00000581003 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
CBX1-206ENST00000581003 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
CBX1-206ENST00000581003 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
CBX1-206ENST00000581003 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
CBX1-206ENST00000581003 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
CBX1-206ENST00000581003 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
CBX1-206ENST00000581003 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
CBX1-206ENST00000581003 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
CBX1-206ENST00000581003 CHRNA5P30532 468 aa16.58■□□□□ 0.24
CBX1-206ENST00000581003 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
CBX1-206ENST00000581003 KCNA3P22001 575 aa16.57■□□□□ 0.24
CBX1-206ENST00000581003 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
CBX1-206ENST00000581003 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
CBX1-206ENST00000581003 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
CBX1-206ENST00000581003 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
CBX1-206ENST00000581003 SERPINB2P05120 415 aa16.55■□□□□ 0.24
CBX1-206ENST00000581003 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
CBX1-206ENST00000581003 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
CBX1-206ENST00000581003 A0A087WZG4 1122 aa16.54■□□□□ 0.24
CBX1-206ENST00000581003 APAF1O14727 1248 aa16.54■□□□□ 0.24
CBX1-206ENST00000581003 TGFB2P61812 414 aa16.54■□□□□ 0.24
CBX1-206ENST00000581003 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
CBX1-206ENST00000581003 BCS1LQ9Y276 419 aa16.54■□□□□ 0.24
CBX1-206ENST00000581003 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
CBX1-206ENST00000581003 CHD4Q14839 1912 aa16.53■□□□□ 0.24
CBX1-206ENST00000581003 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
CBX1-206ENST00000581003 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
CBX1-206ENST00000581003 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 ANXA1P04083 346 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 MYL6BP14649 208 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 HLFQ16534 295 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
CBX1-206ENST00000581003 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
CBX1-206ENST00000581003 CHL1O00533 1208 aa16.49■□□□□ 0.23
CBX1-206ENST00000581003 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
CBX1-206ENST00000581003 PDIA6Q15084 440 aa16.49■□□□□ 0.23
CBX1-206ENST00000581003 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
CBX1-206ENST00000581003 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
CBX1-206ENST00000581003 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
CBX1-206ENST00000581003 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms