RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 USPL1Q5W0Q7 1092 aa15.61■□□□□ 0.09
SUPT4H1-203ENST00000579289 PRDM10Q9NQV6 1147 aa15.61■□□□□ 0.09
SUPT4H1-203ENST00000579289 CREBZFQ9NS37 354 aa15.61■□□□□ 0.09
SUPT4H1-203ENST00000579289 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
SUPT4H1-203ENST00000579289 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
SUPT4H1-203ENST00000579289 FER1L6Q2WGJ9 1857 aa15.6■□□□□ 0.09
SUPT4H1-203ENST00000579289 PASKQ96RG2 1323 aa15.6■□□□□ 0.09
SUPT4H1-203ENST00000579289 VIRMAQ69YN4 1812 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-203ENST00000579289 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-203ENST00000579289 CNTNAP1P78357 1384 aa15.59■□□□□ 0.09
SUPT4H1-203ENST00000579289 ANKRD31Q8N7Z5 1873 aa15.59■□□□□ 0.09
SUPT4H1-203ENST00000579289 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
SUPT4H1-203ENST00000579289 CABP4P57796 275 aa15.58■□□□□ 0.08
SUPT4H1-203ENST00000579289 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
SUPT4H1-203ENST00000579289 AEBP1Q8IUX7 1158 aa15.57■□□□□ 0.08
SUPT4H1-203ENST00000579289 DNAJC10Q8IXB1 793 aa15.57■□□□□ 0.08
SUPT4H1-203ENST00000579289 TTLL6Q8N841 843 aa15.57■□□□□ 0.08
SUPT4H1-203ENST00000579289 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
SUPT4H1-203ENST00000579289 SERPINB2P05120 415 aa15.56■□□□□ 0.08
SUPT4H1-203ENST00000579289 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
SUPT4H1-203ENST00000579289 WBP1LQ9NX94 342 aa15.56■□□□□ 0.08
SUPT4H1-203ENST00000579289 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
SUPT4H1-203ENST00000579289 COL11A2P13942 1736 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-203ENST00000579289 ADAMTSL1Q8N6G6 1762 aa15.55■□□□□ 0.08
SUPT4H1-203ENST00000579289 ITGBL1O95965 494 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-203ENST00000579289 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-203ENST00000579289 ZNF530Q6P9A1 599 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-203ENST00000579289 MRC1P22897 1456 aa15.54■□□□□ 0.08
SUPT4H1-203ENST00000579289 VEGFBP49765 207 aa15.54■□□□□ 0.08
SUPT4H1-203ENST00000579289 MTHFSP49914 203 aa15.54■□□□□ 0.08
SUPT4H1-203ENST00000579289 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
SUPT4H1-203ENST00000579289 AMOTQ4VCS5 1084 aa15.53■□□□□ 0.08
SUPT4H1-203ENST00000579289 C2CD5Q86YS7 1000 aa15.53■□□□□ 0.08
SUPT4H1-203ENST00000579289 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
SUPT4H1-203ENST00000579289 COL15A1P39059 1388 aa15.52■□□□□ 0.08
SUPT4H1-203ENST00000579289 LTBP3Q9NS15 1303 aa15.52■□□□□ 0.08
SUPT4H1-203ENST00000579289 TNRC18O15417 2968 aaPredicted RBP15.51■□□□□ 0.07
SUPT4H1-203ENST00000579289 ZPR1O75312 459 aa15.51■□□□□ 0.07
SUPT4H1-203ENST00000579289 RGS19P49795 217 aa15.51■□□□□ 0.07
SUPT4H1-203ENST00000579289 LGR6Q9HBX8 967 aa15.51■□□□□ 0.07
SUPT4H1-203ENST00000579289 SLX4Q8IY92 1834 aa15.5■□□□□ 0.07
SUPT4H1-203ENST00000579289 HSPA8P11142 646 aaKnown RBP15.5■□□□□ 0.07
SUPT4H1-203ENST00000579289 CTCFP49711 727 aaPredicted RBP15.5■□□□□ 0.07
SUPT4H1-203ENST00000579289 LBX1P52954 281 aa15.5■□□□□ 0.07
SUPT4H1-203ENST00000579289 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
SUPT4H1-203ENST00000579289 C21orf2O43822 256 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 EIF5P55010 431 aaKnown RBP15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 SLC39A6Q13433 755 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 C7orf43Q8WVR3 580 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 ABHD8Q96I13 439 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
SUPT4H1-203ENST00000579289 H0YIN7 160 aa15.48■□□□□ 0.07
SUPT4H1-203ENST00000579289 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
SUPT4H1-203ENST00000579289 SCN4AP35499 1836 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 TNNT2P45379 298 aaPredicted RBP15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 TBC1D9BQ66K14 1250 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 PRR5LQ6MZQ0 368 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 BRIP1Q9BX63 1249 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
SUPT4H1-203ENST00000579289 IL13P35225 146 aa15.46■□□□□ 0.07
SUPT4H1-203ENST00000579289 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
SUPT4H1-203ENST00000579289 CCDC24Q8N4L8 307 aa15.46■□□□□ 0.07
SUPT4H1-203ENST00000579289 SCN7AQ01118 1682 aa15.45■□□□□ 0.06
SUPT4H1-203ENST00000579289 TMEM88BA6NKF7 163 aa15.45■□□□□ 0.06
SUPT4H1-203ENST00000579289 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 AKAP4Q5JQC9 854 aa15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 C1orf141Q5JVX7 400 aa15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
SUPT4H1-203ENST00000579289 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 SRGNP10124 158 aa15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 TAOK3Q9H2K8 898 aa15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
SUPT4H1-203ENST00000579289 BICDL1Q6ZP65 573 aa15.42■□□□□ 0.06
SUPT4H1-203ENST00000579289 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.06
SUPT4H1-203ENST00000579289 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
SUPT4H1-203ENST00000579289 PDZRN3Q9UPQ7 1066 aa15.41■□□□□ 0.06
SUPT4H1-203ENST00000579289 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
SUPT4H1-203ENST00000579289 KLRG2A4D1S0 409 aaPredicted RBP15.4■□□□□ 0.06
SUPT4H1-203ENST00000579289 PDE6BP35913 854 aa15.4■□□□□ 0.06
SUPT4H1-203ENST00000579289 STYK1Q6J9G0 422 aa15.4■□□□□ 0.06
SUPT4H1-203ENST00000579289 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-203ENST00000579289 COL4A5P29400 1685 aa15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 CANXP27824 592 aaKnown RBP15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 FMR1Q06787 632 aaKnown RBP eCLIP15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 DEFB115Q30KQ5 88 aa15.39■□□□□ 0.05
SUPT4H1-203ENST00000579289 OLFM4Q6UX06 510 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms