RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
PPP4R1-211ENST00000578875 COG3Q96JB2 828 aa11.39□□□□□ -0.59
PPP4R1-211ENST00000578875 RAB3GAP2Q9H2M9 1393 aa11.39□□□□□ -0.59
PPP4R1-211ENST00000578875 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
PPP4R1-211ENST00000578875 USP42Q9H9J4 1324 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-211ENST00000578875 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
PPP4R1-211ENST00000578875 KDRP35968 1356 aa11.38□□□□□ -0.59
PPP4R1-211ENST00000578875 MYH14Q7Z406 1995 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 NFIXQ14938 502 aa11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
PPP4R1-211ENST00000578875 SERPINB2P05120 415 aa11.36□□□□□ -0.59
PPP4R1-211ENST00000578875 CST9Q5W186 159 aa11.36□□□□□ -0.59
PPP4R1-211ENST00000578875 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.593e-8■□□□□ 10.5
PPP4R1-211ENST00000578875 DDX21Q9NR30 783 aaKnown RBP eCLIP11.36□□□□□ -0.59
PPP4R1-211ENST00000578875 IQCA1LA6NCM1 817 aa11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 H0YIN7 160 aa11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 PHKG2P15735 406 aa11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 INTS5Q6P9B9 1019 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
PPP4R1-211ENST00000578875 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 EPHX2P34913 555 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 ZNF541Q9H0D2 1346 aa11.34□□□□□ -0.59
PPP4R1-211ENST00000578875 TRAF5O00463 557 aa11.33□□□□□ -0.6
PPP4R1-211ENST00000578875 ECE1P42892 770 aa11.33□□□□□ -0.6
PPP4R1-211ENST00000578875 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
PPP4R1-211ENST00000578875 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
PPP4R1-211ENST00000578875 ZPR1O75312 459 aa11.32□□□□□ -0.6
PPP4R1-211ENST00000578875 MAP2K2P36507 400 aa11.32□□□□□ -0.6
PPP4R1-211ENST00000578875 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
PPP4R1-211ENST00000578875 TAOK3Q9H2K8 898 aa11.32□□□□□ -0.6
PPP4R1-211ENST00000578875 RNF123Q5XPI4 1314 aa11.32□□□□□ -0.6
PPP4R1-211ENST00000578875 FYB1O15117 783 aa11.31□□□□□ -0.6
PPP4R1-211ENST00000578875 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
PPP4R1-211ENST00000578875 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
PPP4R1-211ENST00000578875 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
PPP4R1-211ENST00000578875 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
PPP4R1-211ENST00000578875 INSRP06213 1382 aa11.3□□□□□ -0.6
PPP4R1-211ENST00000578875 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
PPP4R1-211ENST00000578875 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 DLL1O00548 723 aa11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 EYA1Q99502 592 aa11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 AFDNP55196 1824 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-211ENST00000578875 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 PNMA8AQ86V59 439 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 EMILIN1Q9Y6C2 1016 aa11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
PPP4R1-211ENST00000578875 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.6
PPP4R1-211ENST00000578875 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.61
PPP4R1-211ENST00000578875 CABP4P57796 275 aa11.27□□□□□ -0.61
PPP4R1-211ENST00000578875 DNAJC10Q8IXB1 793 aa11.27□□□□□ -0.61
PPP4R1-211ENST00000578875 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-211ENST00000578875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.612e-7■■□□□ 11.6
PPP4R1-211ENST00000578875 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
PPP4R1-211ENST00000578875 SCN4AP35499 1836 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 CA12O43570 354 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 EPS15P42566 896 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 SAPCD2Q86UD0 394 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 ROCK2O75116 1388 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-211ENST00000578875 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 DLEC1Q9Y238 1755 aa11.25□□□□□ -0.61
PPP4R1-211ENST00000578875 SLX4Q8IY92 1834 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 GCC1Q96CN9 775 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 BRIP1Q9BX63 1249 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 FLT4P35916 1363 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
PPP4R1-211ENST00000578875 FZD9O00144 591 aa11.23□□□□□ -0.61
PPP4R1-211ENST00000578875 PDE6BP35913 854 aa11.23□□□□□ -0.61
PPP4R1-211ENST00000578875 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
PPP4R1-211ENST00000578875 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
PPP4R1-211ENST00000578875 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
PPP4R1-211ENST00000578875 CELF2O95319 508 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 SRGNP10124 158 aa11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 CYP19A1P11511 503 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 NCAPD2Q15021 1401 aa11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 ZNF831Q5JPB2 1677 aa11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 DLK2Q6UY11 383 aa11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
PPP4R1-211ENST00000578875 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms