RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 ACIN1Q9UKV3 1341 aaKnown RBP6.65□□□□□ -1.35
CDC27-218ENST00000575830 F11P03951 625 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 SWI5Q1ZZU3 235 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 TRIM22Q8IYM9 498 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 FAM200AQ8TCP9 573 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 TSPAN10Q9H1Z9 355 aaPredicted RBP6.64□□□□□ -1.35
CDC27-218ENST00000575830 CRISPLD1Q9H336 500 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 TIMMDC1Q9NPL8 285 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 ZDHHC3Q9NYG2 299 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 ERBB4Q15303 1308 aa6.64□□□□□ -1.35
CDC27-218ENST00000575830 EML1O00423 815 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 WFS1O76024 890 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 ATP4AP20648 1035 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 IGFBP4P22692 258 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 MSX1P28360 303 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
CDC27-218ENST00000575830 DBN1Q16643 649 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
CDC27-218ENST00000575830 C2orf49Q9BVC5 232 aaPredicted RBP6.63□□□□□ -1.35
CDC27-218ENST00000575830 ATAD2Q6PL18 1390 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 WIPF1O43516 503 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 NOS2P35228 1153 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 PSMA6P60900 246 aaKnown RBP6.62□□□□□ -1.35
CDC27-218ENST00000575830 OCLNQ16625 522 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 GPR161Q8N6U8 529 aaKnown RBP6.62□□□□□ -1.35
CDC27-218ENST00000575830 SLC16A10Q8TF71 515 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 SLAIN2Q9P270 581 aa6.62□□□□□ -1.35
CDC27-218ENST00000575830 TMEM88BA6NKF7 163 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
CDC27-218ENST00000575830 PHKA2P46019 1235 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 VEGFBP49765 207 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 TMEM164Q5U3C3 297 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 C1orf53Q5VUE5 145 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 IRF7Q92985 503 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 CLP1Q92989 425 aaKnown RBP6.61□□□□□ -1.35
CDC27-218ENST00000575830 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
CDC27-218ENST00000575830 RBM19Q9Y4C8 960 aaKnown RBP6.61□□□□□ -1.35
CDC27-218ENST00000575830 GPC6Q9Y625 555 aaPredicted RBP6.61□□□□□ -1.35
CDC27-218ENST00000575830 PLA2G4AP47712 749 aa6.6□□□□□ -1.35
CDC27-218ENST00000575830 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
CDC27-218ENST00000575830 NDFIP2Q9NV92 336 aa6.6□□□□□ -1.35
CDC27-218ENST00000575830 SERTM1A2A2V5 107 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 TXLNAP40222 546 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 TBCELQ5QJ74 424 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 NLRP8Q86W28 1048 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 CABP1Q9NZU7 370 aa6.59□□□□□ -1.35
CDC27-218ENST00000575830 H7C1W4 665 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 FOXO3O43524 673 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
CDC27-218ENST00000575830 KRT76Q01546 638 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 SV2AQ7L0J3 742 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 VWA5B2Q8N398 1253 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
CDC27-218ENST00000575830 COL26A1Q96A83 441 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
CDC27-218ENST00000575830 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
CDC27-218ENST00000575830 GMPRP36959 345 aa6.57□□□□□ -1.36
CDC27-218ENST00000575830 GAS6Q14393 721 aa6.57□□□□□ -1.36
CDC27-218ENST00000575830 SAMD5Q5TGI4 173 aa6.57□□□□□ -1.36
CDC27-218ENST00000575830 GAS2L1Q99501 681 aaPredicted RBP6.57□□□□□ -1.36
CDC27-218ENST00000575830 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
CDC27-218ENST00000575830 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
CDC27-218ENST00000575830 NBPF1Q3BBV0 1214 aa6.56□□□□□ -1.36
CDC27-218ENST00000575830 KLRG1Q96E93 195 aa6.56□□□□□ -1.36
CDC27-218ENST00000575830 NUCKS1Q9H1E3 243 aaKnown RBP6.56□□□□□ -1.36
CDC27-218ENST00000575830 CXXC1Q9P0U4 656 aaPredicted RBP6.56□□□□□ -1.36
CDC27-218ENST00000575830 HCN2Q9UL51 889 aa6.56□□□□□ -1.36
CDC27-218ENST00000575830 A0A1W2PNR3 127 aa6.55□□□□□ -1.36
CDC27-218ENST00000575830 RNFT1Q5M7Z0 435 aa6.55□□□□□ -1.36
CDC27-218ENST00000575830 MYO19Q96H55 970 aa6.55□□□□□ -1.36
CDC27-218ENST00000575830 RUBCNLQ9H714 662 aa6.55□□□□□ -1.36
CDC27-218ENST00000575830 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
CDC27-218ENST00000575830 EFSO43281 561 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 LGR5O75473 907 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 TATP17735 454 aaPredicted RBP6.54□□□□□ -1.36
CDC27-218ENST00000575830 FKBP5Q13451 457 aaPredicted RBP6.54□□□□□ -1.36
CDC27-218ENST00000575830 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 ZCCHC2Q9C0B9 1178 aaKnown RBP6.54□□□□□ -1.36
CDC27-218ENST00000575830 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
CDC27-218ENST00000575830 BNIP3LO60238 219 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 SLURP2P0DP57 97 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 CSB-PGBD3P0DP91 1061 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 SSFA2P28290 1259 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 RTN1Q16799 776 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 PHLDB3Q6NSJ2 640 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 PGBD3Q8N328 593 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 GTPBP3Q969Y2 492 aaKnown RBP6.53□□□□□ -1.36
CDC27-218ENST00000575830 AIDAQ96BJ3 306 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
CDC27-218ENST00000575830 QTRT2Q9H974 415 aaKnown RBP6.53□□□□□ -1.36
CDC27-218ENST00000575830 DMGDHQ9UI17 866 aaKnown RBP6.53□□□□□ -1.36
CDC27-218ENST00000575830 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 HCN4Q9Y3Q4 1203 aa6.53□□□□□ -1.36
CDC27-218ENST00000575830 FAM157BP0CG42 384 aa6.52□□□□□ -1.37
CDC27-218ENST00000575830 TNP2Q05952 138 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms