RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 LMNB1P20700 586 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 NFIXQ14938 502 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
CALCOCO2-227ENST00000575560 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
CALCOCO2-227ENST00000575560 RASSF7Q02833 373 aa13.65□□□□□ -0.22
CALCOCO2-227ENST00000575560 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
CALCOCO2-227ENST00000575560 SERPINB2P05120 415 aa13.64□□□□□ -0.23
CALCOCO2-227ENST00000575560 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
CALCOCO2-227ENST00000575560 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-227ENST00000575560 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
CALCOCO2-227ENST00000575560 POTECB2RU33 542 aa13.62□□□□□ -0.23
CALCOCO2-227ENST00000575560 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
CALCOCO2-227ENST00000575560 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
CALCOCO2-227ENST00000575560 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
CALCOCO2-227ENST00000575560 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
CALCOCO2-227ENST00000575560 COL15A1P39059 1388 aa13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 NFKBIEO00221 500 aa13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 TNS4Q8IZW8 715 aa13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
CALCOCO2-227ENST00000575560 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-227ENST00000575560 H0YIN7 160 aa13.6□□□□□ -0.23
CALCOCO2-227ENST00000575560 MRC1P22897 1456 aa13.6□□□□□ -0.23
CALCOCO2-227ENST00000575560 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
CALCOCO2-227ENST00000575560 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
CALCOCO2-227ENST00000575560 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
CALCOCO2-227ENST00000575560 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
CALCOCO2-227ENST00000575560 CAPN15O75808 1086 aa13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 HSPA1AP0DMV8 641 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 HSPA1BP0DMV9 641 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
CALCOCO2-227ENST00000575560 HMOX1P09601 288 aa13.57□□□□□ -0.24
CALCOCO2-227ENST00000575560 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
CALCOCO2-227ENST00000575560 BRIP1Q9BX63 1249 aa13.57□□□□□ -0.24
CALCOCO2-227ENST00000575560 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
CALCOCO2-227ENST00000575560 DLEC1Q9Y238 1755 aa13.57□□□□□ -0.24
CALCOCO2-227ENST00000575560 STARD3NLO95772 234 aa13.56□□□□□ -0.24
CALCOCO2-227ENST00000575560 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
CALCOCO2-227ENST00000575560 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
CALCOCO2-227ENST00000575560 A0A087WZG4 1122 aa13.55□□□□□ -0.24
CALCOCO2-227ENST00000575560 C21orf2O43822 256 aa13.55□□□□□ -0.24
CALCOCO2-227ENST00000575560 PDE6BP35913 854 aa13.55□□□□□ -0.24
CALCOCO2-227ENST00000575560 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.242e-13■□□□□ 10.8
CALCOCO2-227ENST00000575560 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
CALCOCO2-227ENST00000575560 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
CALCOCO2-227ENST00000575560 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO2-227ENST00000575560 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
CALCOCO2-227ENST00000575560 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
CALCOCO2-227ENST00000575560 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
CALCOCO2-227ENST00000575560 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO2-227ENST00000575560 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CALCOCO2-227ENST00000575560 TBC1D2BQ9UPU7 963 aa13.53□□□□□ -0.24
CALCOCO2-227ENST00000575560 DIAPH1O60610 1272 aaKnown RBP13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 IL6STP40189 918 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
CALCOCO2-227ENST00000575560 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
CALCOCO2-227ENST00000575560 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-227ENST00000575560 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-227ENST00000575560 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
CALCOCO2-227ENST00000575560 POTEJP0CG39 1038 aa13.51□□□□□ -0.25
CALCOCO2-227ENST00000575560 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 SRGNP10124 158 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 CNKSR1Q969H4 720 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
CALCOCO2-227ENST00000575560 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 A1BGP04217 495 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 TEFQ10587 303 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-227ENST00000575560 PASKQ96RG2 1323 aa13.48□□□□□ -0.25
CALCOCO2-227ENST00000575560 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
CALCOCO2-227ENST00000575560 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
CALCOCO2-227ENST00000575560 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
CALCOCO2-227ENST00000575560 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
CALCOCO2-227ENST00000575560 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
CALCOCO2-227ENST00000575560 L3MBTL3Q96JM7 780 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms