RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
HCFC1R1-206ENST00000574151 FER1L6Q2WGJ9 1857 aa13.73□□□□□ -0.21
HCFC1R1-206ENST00000574151 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
HCFC1R1-206ENST00000574151 CYP4F22Q6NT55 531 aa13.72□□□□□ -0.21
HCFC1R1-206ENST00000574151 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
HCFC1R1-206ENST00000574151 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
HCFC1R1-206ENST00000574151 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
HCFC1R1-206ENST00000574151 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
HCFC1R1-206ENST00000574151 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
HCFC1R1-206ENST00000574151 MIER1Q8N108 512 aa13.71□□□□□ -0.21
HCFC1R1-206ENST00000574151 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
HCFC1R1-206ENST00000574151 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.21
HCFC1R1-206ENST00000574151 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 RC3H1Q5TC82 1133 aaKnown RBP13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
HCFC1R1-206ENST00000574151 AOC2O75106 756 aa13.69□□□□□ -0.22
HCFC1R1-206ENST00000574151 RRS1Q15050 365 aaKnown RBP13.69□□□□□ -0.22
HCFC1R1-206ENST00000574151 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
HCFC1R1-206ENST00000574151 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 C21orf2O43822 256 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 TM4SF1P30408 202 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 ECE1P42892 770 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 C2CD5Q86YS7 1000 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
HCFC1R1-206ENST00000574151 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
HCFC1R1-206ENST00000574151 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
HCFC1R1-206ENST00000574151 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
HCFC1R1-206ENST00000574151 COG3Q96JB2 828 aa13.67□□□□□ -0.22
HCFC1R1-206ENST00000574151 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
HCFC1R1-206ENST00000574151 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
HCFC1R1-206ENST00000574151 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
HCFC1R1-206ENST00000574151 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
HCFC1R1-206ENST00000574151 H0YIN7 160 aa13.65□□□□□ -0.22
HCFC1R1-206ENST00000574151 KDRP35968 1356 aa13.65□□□□□ -0.22
HCFC1R1-206ENST00000574151 ADAMTSL1Q8N6G6 1762 aa13.65□□□□□ -0.22
HCFC1R1-206ENST00000574151 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 HSP90AB2PQ58FF8 381 aa13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 ZNF622Q969S3 477 aaKnown RBP eCLIP13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 HACL1Q9UJ83 578 aa13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
HCFC1R1-206ENST00000574151 EPHX2P34913 555 aa13.63□□□□□ -0.23
HCFC1R1-206ENST00000574151 USPL1Q5W0Q7 1092 aa13.63□□□□□ -0.23
HCFC1R1-206ENST00000574151 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
HCFC1R1-206ENST00000574151 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
HCFC1R1-206ENST00000574151 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 DLL1O00548 723 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 ZPR1O75312 459 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 MAP2K2P36507 400 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
HCFC1R1-206ENST00000574151 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
HCFC1R1-206ENST00000574151 CA12O43570 354 aa13.61□□□□□ -0.23
HCFC1R1-206ENST00000574151 SERPINB2P05120 415 aa13.61□□□□□ -0.23
HCFC1R1-206ENST00000574151 NFIXQ14938 502 aa13.61□□□□□ -0.23
HCFC1R1-206ENST00000574151 ANKRD31Q8N7Z5 1873 aa13.61□□□□□ -0.23
HCFC1R1-206ENST00000574151 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
HCFC1R1-206ENST00000574151 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
HCFC1R1-206ENST00000574151 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
HCFC1R1-206ENST00000574151 CARMIL3Q8ND23 1372 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 PHKG2P15735 406 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 ZNF541Q9H0D2 1346 aa13.59□□□□□ -0.23
HCFC1R1-206ENST00000574151 CST9Q5W186 159 aa13.58□□□□□ -0.24
HCFC1R1-206ENST00000574151 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
HCFC1R1-206ENST00000574151 TRAF5O00463 557 aa13.57□□□□□ -0.24
HCFC1R1-206ENST00000574151 CCDC24Q8N4L8 307 aa13.57□□□□□ -0.24
HCFC1R1-206ENST00000574151 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
HCFC1R1-206ENST00000574151 LTBP3Q9NS15 1303 aa13.57□□□□□ -0.24
HCFC1R1-206ENST00000574151 INSRP06213 1382 aa13.57□□□□□ -0.24
HCFC1R1-206ENST00000574151 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
HCFC1R1-206ENST00000574151 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
HCFC1R1-206ENST00000574151 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
HCFC1R1-206ENST00000574151 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
HCFC1R1-206ENST00000574151 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
HCFC1R1-206ENST00000574151 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
HCFC1R1-206ENST00000574151 AKAP11Q9UKA4 1901 aa13.54□□□□□ -0.24
HCFC1R1-206ENST00000574151 TJP1Q07157 1748 aa13.54□□□□□ -0.24
HCFC1R1-206ENST00000574151 FXR1P51114 621 aaKnown RBP eCLIP13.54□□□□□ -0.24
HCFC1R1-206ENST00000574151 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
HCFC1R1-206ENST00000574151 ZIC5Q96T25 663 aa13.53□□□□□ -0.24
HCFC1R1-206ENST00000574151 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
HCFC1R1-206ENST00000574151 ERVV-2B6SEH9 535 aa13.52□□□□□ -0.25
HCFC1R1-206ENST00000574151 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.25
HCFC1R1-206ENST00000574151 ZNF277Q9NRM2 450 aaPredicted RBP13.52□□□□□ -0.25
HCFC1R1-206ENST00000574151 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
HCFC1R1-206ENST00000574151 FLT4P35916 1363 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms