RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SOS1Q07889 1333 aaPredicted RBP17.49■□□□□ 0.39
RNF40-208ENST00000565995 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
RNF40-208ENST00000565995 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 ZPR1O75312 459 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 IL13P35225 146 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
RNF40-208ENST00000565995 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
RNF40-208ENST00000565995 HTRA3P83110 453 aa17.47■□□□□ 0.39
RNF40-208ENST00000565995 USPL1Q5W0Q7 1092 aa17.47■□□□□ 0.39
RNF40-208ENST00000565995 SMC1BQ8NDV3 1235 aa17.47■□□□□ 0.39
RNF40-208ENST00000565995 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
RNF40-208ENST00000565995 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 LMNB1P20700 586 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 NFIXQ14938 502 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 COL13A1Q5TAT6 717 aaPredicted RBP17.45■□□□□ 0.38
RNF40-208ENST00000565995 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
RNF40-208ENST00000565995 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
RNF40-208ENST00000565995 PRELPP51888 382 aa17.44■□□□□ 0.38
RNF40-208ENST00000565995 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
RNF40-208ENST00000565995 BCL2L12Q9HB09 334 aa17.44■□□□□ 0.38
RNF40-208ENST00000565995 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
RNF40-208ENST00000565995 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
RNF40-208ENST00000565995 COL15A1P39059 1388 aa17.43■□□□□ 0.38
RNF40-208ENST00000565995 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
RNF40-208ENST00000565995 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
RNF40-208ENST00000565995 SERPINB2P05120 415 aa17.42■□□□□ 0.38
RNF40-208ENST00000565995 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
RNF40-208ENST00000565995 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
RNF40-208ENST00000565995 RASSF7Q02833 373 aa17.41■□□□□ 0.38
RNF40-208ENST00000565995 SCN4AP35499 1836 aa17.41■□□□□ 0.38
RNF40-208ENST00000565995 SLX4Q8IY92 1834 aa17.41■□□□□ 0.38
RNF40-208ENST00000565995 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
RNF40-208ENST00000565995 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
RNF40-208ENST00000565995 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
RNF40-208ENST00000565995 POTECB2RU33 542 aa17.39■□□□□ 0.37
RNF40-208ENST00000565995 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
RNF40-208ENST00000565995 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
RNF40-208ENST00000565995 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
RNF40-208ENST00000565995 H0YIN7 160 aa17.38■□□□□ 0.37
RNF40-208ENST00000565995 NFKBIEO00221 500 aa17.38■□□□□ 0.37
RNF40-208ENST00000565995 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
RNF40-208ENST00000565995 C2CD5Q86YS7 1000 aa17.37■□□□□ 0.37
RNF40-208ENST00000565995 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
RNF40-208ENST00000565995 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
RNF40-208ENST00000565995 A0A087WZG4 1122 aa17.35■□□□□ 0.37
RNF40-208ENST00000565995 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
RNF40-208ENST00000565995 STARD3NLO95772 234 aa17.34■□□□□ 0.37
RNF40-208ENST00000565995 DPY19L2Q6NUT2 758 aa17.34■□□□□ 0.37
RNF40-208ENST00000565995 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
RNF40-208ENST00000565995 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
RNF40-208ENST00000565995 HMOX1P09601 288 aa17.33■□□□□ 0.36
RNF40-208ENST00000565995 PDE6BP35913 854 aa17.33■□□□□ 0.36
RNF40-208ENST00000565995 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
RNF40-208ENST00000565995 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
RNF40-208ENST00000565995 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
RNF40-208ENST00000565995 PER1O15534 1290 aaPredicted RBP17.31■□□□□ 0.36
RNF40-208ENST00000565995 HSPA1AP0DMV8 641 aaKnown RBP17.31■□□□□ 0.36
RNF40-208ENST00000565995 HSPA1BP0DMV9 641 aaKnown RBP17.31■□□□□ 0.36
RNF40-208ENST00000565995 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
RNF40-208ENST00000565995 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
RNF40-208ENST00000565995 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
RNF40-208ENST00000565995 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
RNF40-208ENST00000565995 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
RNF40-208ENST00000565995 ERFEQ4G0M1 354 aa17.29■□□□□ 0.36
RNF40-208ENST00000565995 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
RNF40-208ENST00000565995 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
RNF40-208ENST00000565995 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
RNF40-208ENST00000565995 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
RNF40-208ENST00000565995 C21orf2O43822 256 aa17.28■□□□□ 0.36
RNF40-208ENST00000565995 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
RNF40-208ENST00000565995 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
RNF40-208ENST00000565995 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■□□ 15.8
RNF40-208ENST00000565995 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
RNF40-208ENST00000565995 STYK1Q6J9G0 422 aa17.27■□□□□ 0.36
RNF40-208ENST00000565995 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
RNF40-208ENST00000565995 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
RNF40-208ENST00000565995 CEMIPQ8WUJ3 1361 aa17.27■□□□□ 0.35
RNF40-208ENST00000565995 NUP98P52948 1817 aa17.26■□□□□ 0.35
RNF40-208ENST00000565995 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
RNF40-208ENST00000565995 SRGNP10124 158 aa17.26■□□□□ 0.35
RNF40-208ENST00000565995 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
RNF40-208ENST00000565995 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
RNF40-208ENST00000565995 CAPN15O75808 1086 aa17.25■□□□□ 0.35
RNF40-208ENST00000565995 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
RNF40-208ENST00000565995 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
RNF40-208ENST00000565995 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
RNF40-208ENST00000565995 NPC1L1Q9UHC9 1359 aa17.25■□□□□ 0.35
RNF40-208ENST00000565995 TEFQ10587 303 aa17.24■□□□□ 0.35
RNF40-208ENST00000565995 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
RNF40-208ENST00000565995 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
RNF40-208ENST00000565995 MASTLQ96GX5 879 aa17.24■□□□□ 0.35
RNF40-208ENST00000565995 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
RNF40-208ENST00000565995 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms