RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD9-205ENST00000562785 DNMT3AQ9Y6K1 912 aaPredicted RBP9.75□□□□□ -0.85
CHD9-205ENST00000562785 SERTM1A2A2V5 107 aa9.74□□□□□ -0.85
CHD9-205ENST00000562785 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
CHD9-205ENST00000562785 ICMTO60725 284 aa9.74□□□□□ -0.85
CHD9-205ENST00000562785 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
CHD9-205ENST00000562785 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
CHD9-205ENST00000562785 CCDC27Q2M243 656 aa9.74□□□□□ -0.85
CHD9-205ENST00000562785 CTC1Q2NKJ3 1217 aa9.74□□□□□ -0.85
CHD9-205ENST00000562785 TMEM214Q6NUQ4 689 aaKnown RBP9.74□□□□□ -0.85
CHD9-205ENST00000562785 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
CHD9-205ENST00000562785 H3BRB1 525 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 DGAT1O75907 488 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 BMP2P12643 396 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
CHD9-205ENST00000562785 NOS2P35228 1153 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 CTSOP43234 321 aaPredicted RBP9.73□□□□□ -0.85
CHD9-205ENST00000562785 NAA30Q147X3 362 aaPredicted RBP9.73□□□□□ -0.85
CHD9-205ENST00000562785 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
CHD9-205ENST00000562785 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
CHD9-205ENST00000562785 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
CHD9-205ENST00000562785 SPATA31C2B4DYI2 1134 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 GNASQ5JWF2 1037 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 C16orf46Q6P387 395 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 CRIPAKQ8N1N5 446 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 L3MBTL2Q969R5 705 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 MYO19Q96H55 970 aa9.72□□□□□ -0.85
CHD9-205ENST00000562785 QTRT2Q9H974 415 aaKnown RBP9.72□□□□□ -0.85
CHD9-205ENST00000562785 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHD9-205ENST00000562785 PKDCCQ504Y2 493 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 C6orf118Q5T5N4 469 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 SH3PXD2AQ5TCZ1 1133 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 RNF217Q8TC41 542 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
CHD9-205ENST00000562785 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
CHD9-205ENST00000562785 C4orf17Q53FE4 359 aa9.7□□□□□ -0.86
CHD9-205ENST00000562785 SAP130Q9H0E3 1048 aa9.7□□□□□ -0.86
CHD9-205ENST00000562785 GFRA3O60609 400 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 BMP1P13497 986 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 NPR3P17342 541 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 SCARF1Q14162 830 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 ECM1Q16610 540 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 COX20Q5RI15 118 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 RGS22Q8NE09 1264 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
CHD9-205ENST00000562785 TNFRSF10BO14763 440 aa9.68□□□□□ -0.86
CHD9-205ENST00000562785 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
CHD9-205ENST00000562785 ALDH16A1Q8IZ83 802 aa9.68□□□□□ -0.86
CHD9-205ENST00000562785 BIN2Q9UBW5 565 aaPredicted RBP9.68□□□□□ -0.86
CHD9-205ENST00000562785 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
CHD9-205ENST00000562785 AXIN1O15169 862 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 LAPTM4AQ15012 233 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 RTN1Q16799 776 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 C1orf53Q5VUE5 145 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 PHACTR1Q9C0D0 580 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 LRFN2Q9ULH4 789 aa9.67□□□□□ -0.86
CHD9-205ENST00000562785 TTLL8A6PVC2 850 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 ARHGAP4P98171 946 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
CHD9-205ENST00000562785 LYSMD3Q7Z3D4 306 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 ZDHHC3Q9NYG2 299 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
CHD9-205ENST00000562785 FAM13AO94988 1023 aa9.65□□□□□ -0.86
CHD9-205ENST00000562785 MPSTP25325 297 aa9.65□□□□□ -0.86
CHD9-205ENST00000562785 TXLNAP40222 546 aa9.65□□□□□ -0.86
CHD9-205ENST00000562785 STIM2Q9P246 746 aa9.65□□□□□ -0.86
CHD9-205ENST00000562785 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
CHD9-205ENST00000562785 POU4F2Q12837 409 aa9.64□□□□□ -0.87
CHD9-205ENST00000562785 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
CHD9-205ENST00000562785 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
CHD9-205ENST00000562785 ZFP42Q96MM3 310 aa9.64□□□□□ -0.87
CHD9-205ENST00000562785 PHKA2P46019 1235 aa9.63□□□□□ -0.87
CHD9-205ENST00000562785 DNAJC14Q6Y2X3 702 aaPredicted RBP9.63□□□□□ -0.87
CHD9-205ENST00000562785 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CHD9-205ENST00000562785 DGKZQ13574 1117 aa9.62□□□□□ -0.87
CHD9-205ENST00000562785 C11orf91Q3C1V1 193 aa9.62□□□□□ -0.87
CHD9-205ENST00000562785 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
CHD9-205ENST00000562785 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
CHD9-205ENST00000562785 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
CHD9-205ENST00000562785 ATP4AP20648 1035 aa9.61□□□□□ -0.87
CHD9-205ENST00000562785 BRD2P25440 801 aaKnown RBP9.61□□□□□ -0.87
CHD9-205ENST00000562785 A0A1B0GTH6 734 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 RHOQP17081 205 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
CHD9-205ENST00000562785 ERCC3P19447 782 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 EIF1AXP47813 144 aaKnown RBP9.6□□□□□ -0.87
CHD9-205ENST00000562785 NOM1Q5C9Z4 860 aaKnown RBP9.6□□□□□ -0.87
CHD9-205ENST00000562785 FAM26DQ5JW98 314 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 ALKBH2Q6NS38 261 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 RHPN1Q8TCX5 695 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 AIDAQ96BJ3 306 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms