RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 BCL9O00512 1426 aa18.11■□□□□ 0.49
CNN2-204ENST00000562075 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
CNN2-204ENST00000562075 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
CNN2-204ENST00000562075 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
CNN2-204ENST00000562075 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
CNN2-204ENST00000562075 FBXO41Q8TF61 875 aa18.09■□□□□ 0.49
CNN2-204ENST00000562075 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
CNN2-204ENST00000562075 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
CNN2-204ENST00000562075 F6X3S4 739 aa18.08■□□□□ 0.48
CNN2-204ENST00000562075 ANXA1P04083 346 aa18.08■□□□□ 0.48
CNN2-204ENST00000562075 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
CNN2-204ENST00000562075 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
CNN2-204ENST00000562075 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
CNN2-204ENST00000562075 CCT4P50991 539 aaKnown RBP18.07■□□□□ 0.48
CNN2-204ENST00000562075 PROSER3Q2NL68 480 aa18.07■□□□□ 0.48
CNN2-204ENST00000562075 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
CNN2-204ENST00000562075 USP16Q9Y5T5 823 aa18.07■□□□□ 0.48
CNN2-204ENST00000562075 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
CNN2-204ENST00000562075 CENPQQ7L2Z9 268 aaPredicted RBP18.06■□□□□ 0.48
CNN2-204ENST00000562075 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
CNN2-204ENST00000562075 QTRT2Q9H974 415 aaKnown RBP18.06■□□□□ 0.48
CNN2-204ENST00000562075 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
CNN2-204ENST00000562075 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
CNN2-204ENST00000562075 ZBTB7BO15156 539 aaPredicted RBP18.05■□□□□ 0.48
CNN2-204ENST00000562075 PDIA6Q15084 440 aa18.05■□□□□ 0.48
CNN2-204ENST00000562075 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
CNN2-204ENST00000562075 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
CNN2-204ENST00000562075 KDM2BQ8NHM5 1336 aa18.04■□□□□ 0.48
CNN2-204ENST00000562075 MYL6BP14649 208 aa18.04■□□□□ 0.48
CNN2-204ENST00000562075 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
CNN2-204ENST00000562075 PCDHB15Q9Y5E8 787 aa18.04■□□□□ 0.48
CNN2-204ENST00000562075 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
CNN2-204ENST00000562075 VSIG10Q8N0Z9 540 aa18.03■□□□□ 0.48
CNN2-204ENST00000562075 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CNN2-204ENST00000562075 DNAAF4Q8WXU2 420 aa18.02■□□□□ 0.48
CNN2-204ENST00000562075 ADCY9O60503 1353 aa18.02■□□□□ 0.47
CNN2-204ENST00000562075 PI4KAP2A4QPH2 592 aa18.01■□□□□ 0.47
CNN2-204ENST00000562075 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
CNN2-204ENST00000562075 AIMP1Q12904 312 aaKnown RBP18.01■□□□□ 0.47
CNN2-204ENST00000562075 SEPT12Q8IYM1 358 aa18.01■□□□□ 0.47
CNN2-204ENST00000562075 PI4KAP1Q8N8J0 262 aa18.01■□□□□ 0.47
CNN2-204ENST00000562075 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
CNN2-204ENST00000562075 IGHDP01880 384 aa18■□□□□ 0.47
CNN2-204ENST00000562075 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
CNN2-204ENST00000562075 ZNF772Q68DY9 489 aaPredicted RBP18■□□□□ 0.47
CNN2-204ENST00000562075 KSR2Q6VAB6 950 aa18■□□□□ 0.47
CNN2-204ENST00000562075 DNAJC10Q8IXB1 793 aa18■□□□□ 0.47
CNN2-204ENST00000562075 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
CNN2-204ENST00000562075 STARD3NLO95772 234 aa17.99■□□□□ 0.47
CNN2-204ENST00000562075 SRCIN1Q9C0H9 1055 aa17.99■□□□□ 0.47
CNN2-204ENST00000562075 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
CNN2-204ENST00000562075 MAP3K2Q9Y2U5 619 aa17.99■□□□□ 0.47
CNN2-204ENST00000562075 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 KCNQ2O43526 872 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 A1BGP04217 495 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 LRP10Q7Z4F1 713 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
CNN2-204ENST00000562075 MEIS3Q99687 375 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 NHSQ6T4R5 1651 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 TJP1Q07157 1748 aa17.98■□□□□ 0.47
CNN2-204ENST00000562075 PALLDQ8WX93 1383 aa17.97■□□□□ 0.47
CNN2-204ENST00000562075 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
CNN2-204ENST00000562075 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
CNN2-204ENST00000562075 NBPF14Q5TI25 921 aa17.97■□□□□ 0.47
CNN2-204ENST00000562075 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
CNN2-204ENST00000562075 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
CNN2-204ENST00000562075 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
CNN2-204ENST00000562075 GNAI3P08754 354 aa17.96■□□□□ 0.47
CNN2-204ENST00000562075 BEND3Q5T5X7 828 aa17.96■□□□□ 0.47
CNN2-204ENST00000562075 SLC4A9Q96Q91 983 aa17.96■□□□□ 0.47
CNN2-204ENST00000562075 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
CNN2-204ENST00000562075 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
CNN2-204ENST00000562075 CYP19A1P11511 503 aaPredicted RBP17.94■□□□□ 0.46
CNN2-204ENST00000562075 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
CNN2-204ENST00000562075 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
CNN2-204ENST00000562075 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
CNN2-204ENST00000562075 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 GNAI2P04899 355 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 SIK1P57059 783 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 ARFGEF2Q9Y6D5 1785 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 BTAF1O14981 1849 aa17.93■□□□□ 0.46
CNN2-204ENST00000562075 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
CNN2-204ENST00000562075 ATP6V1AP38606 617 aa17.92■□□□□ 0.46
CNN2-204ENST00000562075 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
CNN2-204ENST00000562075 METTL22Q9BUU2 404 aaPredicted RBP17.92■□□□□ 0.46
CNN2-204ENST00000562075 USP44Q9H0E7 712 aa17.92■□□□□ 0.46
CNN2-204ENST00000562075 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
CNN2-204ENST00000562075 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
CNN2-204ENST00000562075 MYD88Q99836 296 aa17.91■□□□□ 0.46
CNN2-204ENST00000562075 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
CNN2-204ENST00000562075 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
CNN2-204ENST00000562075 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
CNN2-204ENST00000562075 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
CNN2-204ENST00000562075 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
CNN2-204ENST00000562075 CEP85Q6P2H3 762 aa17.9■□□□□ 0.46
CNN2-204ENST00000562075 TTLL7Q6ZT98 887 aa17.9■□□□□ 0.46
CNN2-204ENST00000562075 KRT27Q7Z3Y8 459 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms