RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CNNM3Q8NE01 707 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
SYNM-203ENST00000560674 FGFR1OPO95684 399 aaKnown RBP14.68□□□□□ -0.06
SYNM-203ENST00000560674 CCDC91Q7Z6B0 441 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 NUP88Q99567 741 aaPredicted RBP14.68□□□□□ -0.06
SYNM-203ENST00000560674 MYD88Q99836 296 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 MPHOSPH10O00566 681 aaKnown RBP14.67□□□□□ -0.06
SYNM-203ENST00000560674 USO1O60763 962 aaKnown RBP14.67□□□□□ -0.06
SYNM-203ENST00000560674 KCNH5Q8NCM2 988 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 YEATS4O95619 227 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 STX1AQ16623 288 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 CTCFLQ8NI51 663 aaPredicted RBP14.67□□□□□ -0.06
SYNM-203ENST00000560674 CCDC113Q9H0I3 377 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 CCDC141Q6ZP82 1450 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 SLC12A7Q9Y666 1083 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 GIMAP7Q8NHV1 300 aa14.67□□□□□ -0.06
SYNM-203ENST00000560674 DHX29Q7Z478 1369 aaKnown RBP14.67□□□□□ -0.06
SYNM-203ENST00000560674 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
SYNM-203ENST00000560674 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 ADCY5O95622 1261 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 ZNF213O14771 459 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 CCDC178Q5BJE1 867 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 CALCOCO1Q9P1Z2 691 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 F6X3S4 739 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 TRIM27P14373 513 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 GJB2P29033 226 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
SYNM-203ENST00000560674 STX6O43752 255 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 IFFO1Q0D2I5 559 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 TBC1D9Q6ZT07 1266 aa14.66□□□□□ -0.06
SYNM-203ENST00000560674 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
SYNM-203ENST00000560674 GOLGA8BA8MQT2 603 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 POLR3GO15318 223 aaPredicted RBP14.65□□□□□ -0.06
SYNM-203ENST00000560674 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 RAB34Q9BZG1 259 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 PTPRCP08575 1304 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 NEBLO76041 1014 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 TMC6Q7Z403 805 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
SYNM-203ENST00000560674 MAP3K12Q12852 859 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 EVI5LQ96CN4 794 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 CUL7Q14999 1698 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 POLR3DP05423 398 aaPredicted RBP14.65□□□□□ -0.06
SYNM-203ENST00000560674 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 GOLGA8AA7E2F4 631 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 TNIP1Q15025 636 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 BICDL1Q6ZP65 573 aa14.65□□□□□ -0.06
SYNM-203ENST00000560674 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
SYNM-203ENST00000560674 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
SYNM-203ENST00000560674 MICALCLQ6ZW33 695 aa14.64□□□□□ -0.07
SYNM-203ENST00000560674 GOLGA6L9A6NEM1 432 aa14.64□□□□□ -0.07
SYNM-203ENST00000560674 CCT2P78371 535 aaKnown RBP14.64□□□□□ -0.07
SYNM-203ENST00000560674 RNF41Q9H4P4 317 aaPredicted RBP14.64□□□□□ -0.07
SYNM-203ENST00000560674 C11orf95C9JLR9 678 aaPredicted RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 KIF20AO95235 890 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 ZC3H6P61129 1189 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 KLHL40Q2TBA0 621 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 TDRD12Q587J7 1177 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 FAM107BQ9H098 131 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 MYZAPP0CAP1 466 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 SNW1Q13573 536 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 CCDC82Q8N4S0 544 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 TMX1Q9H3N1 280 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 TFIP11Q9UBB9 837 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 RANBP6O60518 1105 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 UBE2HP62256 183 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 IFIT5Q13325 482 aaKnown RBP14.63□□□□□ -0.07
SYNM-203ENST00000560674 TBC1D32Q96NH3 1257 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 UBA5Q9GZZ9 404 aa14.63□□□□□ -0.07
SYNM-203ENST00000560674 GOLGA6L10A0A0M3HER8 536 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 IFIT3O14879 490 aaKnown RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 ALS2CR12Q96Q35 445 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 CCDC194A0A1B0GVG4 234 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 GSTTP1A0A1W2PQM5 241 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 DNA2P51530 1060 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 SMARCC1Q92922 1105 aaPredicted RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 ECHDC1Q9NTX5 307 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 TMOD2Q9NZR1 351 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 CAVIN2O95810 425 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 ZNF165P49910 485 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 ZNF652Q9Y2D9 606 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 BIN1O00499 593 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 NAA15Q9BXJ9 866 aaKnown RBP14.62□□□□□ -0.07
SYNM-203ENST00000560674 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
SYNM-203ENST00000560674 NLRP5P59047 1200 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms