RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 WDR44Q5JSH3 913 aa6□□□□□ -1.45
HMGB3P26-201ENST00000560051 FBXO31Q5XUX0 539 aaPredicted RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 CYP2U1Q7Z449 544 aa6□□□□□ -1.45
HMGB3P26-201ENST00000560051 FTSJ3Q8IY81 847 aaKnown RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 ACDQ96AP0 544 aa6□□□□□ -1.45
HMGB3P26-201ENST00000560051 TIMMDC1Q9NPL8 285 aa6□□□□□ -1.45
HMGB3P26-201ENST00000560051 NAP1L2Q9ULW6 460 aaPredicted RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 ZNF330Q9Y3S2 320 aaPredicted RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 ACIN1Q9UKV3 1341 aaKnown RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 ZBBXA8MT70 800 aa5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 CLGNO14967 610 aa5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 GIGYF1O75420 1035 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 MCCD1P59942 119 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 TAS1R3Q7RTX0 852 aa5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 ALYREFQ86V81 257 aaKnown RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 UBA5Q9GZZ9 404 aa5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 LAS1LQ9Y4W2 734 aaKnown RBP5.99□□□□□ -1.45
HMGB3P26-201ENST00000560051 K7ELQ4 463 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 PIK3R2O00459 728 aa5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 OIP5O43482 229 aa5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 F11P03951 625 aa5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 NBPF10Q6P3W6 841 aaKnown RBP5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 NBPF15Q8N660 670 aa5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 OXCT2Q9BYC2 517 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 RRAGCQ9HB90 399 aa5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 HMX1Q9NP08 348 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 KIAA1522Q9P206 1035 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P26-201ENST00000560051 RBM47A0AV96 593 aaKnown RBP5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 TPD52L2O43399 206 aaKnown RBP5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 CLN3Q13286 438 aa5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 TMEM259Q4ZIN3 620 aa5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 SND1Q7KZF4 910 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 TMTC2Q8N394 836 aa5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 ZNF622Q969S3 477 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 DRC1Q96MC2 740 aa5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 CFHR5Q9BXR6 569 aa5.97□□□□□ -1.45
HMGB3P26-201ENST00000560051 SPATA31C2B4DYI2 1134 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 WASLO00401 505 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 CSB-PGBD3P0DP91 1061 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 RFC5P40937 340 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 ERVK-9P63128 1117 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 OS9Q13438 667 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 XP32Q5T750 250 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 WWC1Q8IX03 1113 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 PGBD3Q8N328 593 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 PCMTD1Q96MG8 357 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 GRIP2Q9C0E4 1043 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 GDF2Q9UK05 429 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 IVNS1ABPQ9Y6Y0 642 aa5.96□□□□□ -1.46
HMGB3P26-201ENST00000560051 ANKRD62A6NC57 917 aa5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 AMPD1P23109 780 aa5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 RALBP1Q15311 655 aa5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 AXDND1Q5T1B0 1012 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 CCDC181Q5TID7 509 aa5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 MAGEC2Q9UBF1 373 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 NOP58Q9Y2X3 529 aaKnown RBP5.95□□□□□ -1.46
HMGB3P26-201ENST00000560051 MARCH6O60337 910 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 PROCP04070 461 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 FAM193AP78312 1265 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 ANP32BQ92688 251 aaKnown RBP5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 SECISBP2LQ93073 1101 aaKnown RBP5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 TERF2IPQ9NYB0 399 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 PPME1Q9Y570 386 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 PCDHB11Q9Y5F2 797 aa5.94□□□□□ -1.46
HMGB3P26-201ENST00000560051 CARNS1A5YM72 827 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 ANP32CO43423 234 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 MYCP01106 439 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 TCF3P15923 654 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 DEKP35659 375 aaKnown RBP5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 BAG6P46379 1132 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 GNASQ5JWF2 1037 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 GOLGA6L1Q8N7Z2 621 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 EDARADDQ8WWZ3 215 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 MRRFQ96E11 262 aaKnown RBP5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 GPAMQ9HCL2 828 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 COG6Q9Y2V7 657 aa5.93□□□□□ -1.46
HMGB3P26-201ENST00000560051 A0A1B0GTH6 734 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 GNRH1P01148 92 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 FBXO45P0C2W1 286 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 LIG1P18858 919 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 LBRQ14739 615 aaKnown RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 EFHC2Q5JST6 749 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 TMEM214Q6NUQ4 689 aaKnown RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 CASC1Q6TDU7 716 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 SREK1Q8WXA9 508 aaKnown RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 TRIM44Q96DX7 344 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 SIRT1Q96EB6 747 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 ZSCAN10Q96SZ4 725 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 HIRIP3Q9BW71 556 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 TRIM34Q9BYJ4 488 aa5.92□□□□□ -1.46
HMGB3P26-201ENST00000560051 NRDCO43847 1150 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 BMP4P12644 408 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 PHKA2P46019 1235 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 SNRPNP63162 240 aaKnown RBP5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 NR1H3Q13133 447 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms