RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PSMA6P60900 246 aaKnown RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 EFHC2Q5JST6 749 aa6.75□□□□□ -1.33
SPG11-206ENST00000558093 TRIM22Q8IYM9 498 aa6.75□□□□□ -1.33
SPG11-206ENST00000558093 NANOS1Q8WY41 292 aaKnown RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
SPG11-206ENST00000558093 NUCKS1Q9H1E3 243 aaKnown RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
SPG11-206ENST00000558093 CUEDC1Q9NWM3 386 aaPredicted RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 NOVA2Q9UNW9 492 aaKnown RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
SPG11-206ENST00000558093 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
SPG11-206ENST00000558093 PPP1R12BO60237 982 aaPredicted RBP6.74□□□□□ -1.33
SPG11-206ENST00000558093 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
SPG11-206ENST00000558093 FAM200AQ8TCP9 573 aa6.74□□□□□ -1.33
SPG11-206ENST00000558093 PBXIP1Q96AQ6 731 aa6.74□□□□□ -1.33
SPG11-206ENST00000558093 TRERF1Q96PN7 1200 aa6.74□□□□□ -1.33
SPG11-206ENST00000558093 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 SUPT5HO00267 1087 aaKnown RBP6.73□□□□□ -1.33
SPG11-206ENST00000558093 FOXK2Q01167 660 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
SPG11-206ENST00000558093 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 C1orf216Q8TAB5 229 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 CHMP7Q8WUX9 453 aaPredicted RBP6.73□□□□□ -1.33
SPG11-206ENST00000558093 L3MBTL2Q969R5 705 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
SPG11-206ENST00000558093 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
SPG11-206ENST00000558093 GPR25O00155 361 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 LGR5O75473 907 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 DKK1O94907 266 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 TEAD4Q15561 434 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 DBN1Q16643 649 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 SCG3Q8WXD2 468 aaKnown RBP6.72□□□□□ -1.33
SPG11-206ENST00000558093 COL25A1Q9BXS0 654 aaPredicted RBP6.72□□□□□ -1.33
SPG11-206ENST00000558093 ZDHHC3Q9NYG2 299 aa6.72□□□□□ -1.33
SPG11-206ENST00000558093 WIPF1O43516 503 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 ATP4AP20648 1035 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 NOS2P35228 1153 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 INSM1Q01101 510 aaPredicted RBP6.71□□□□□ -1.34
SPG11-206ENST00000558093 LBRQ14739 615 aaKnown RBP6.71□□□□□ -1.34
SPG11-206ENST00000558093 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.34
SPG11-206ENST00000558093 ZDHHC1Q8WTX9 485 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 CNTNAP3BQ96NU0 1288 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 ARXQ96QS3 562 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 ARID3AQ99856 593 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 CNTNAP3Q9BZ76 1288 aa6.71□□□□□ -1.34
SPG11-206ENST00000558093 TXLNAP40222 546 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 RHPN1Q8TCX5 695 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 CRISPLD1Q9H336 500 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 NEUROD4Q9HD90 331 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 PHF24Q9UPV7 400 aa6.7□□□□□ -1.34
SPG11-206ENST00000558093 ATAD2Q6PL18 1390 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 EML1O00423 815 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 ATG7O95352 703 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 ELOAQ14241 798 aaKnown RBP6.69□□□□□ -1.34
SPG11-206ENST00000558093 SH3PXD2AQ5TCZ1 1133 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 FIGNL1Q6PIW4 674 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 GAS2L2Q8NHY3 880 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 STK32AQ8WU08 396 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 ZMIZ1Q9ULJ6 1067 aa6.69□□□□□ -1.34
SPG11-206ENST00000558093 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 IGFBP4P22692 258 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 SWI5Q1ZZU3 235 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 NGLY1Q96IV0 654 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 PHACTR1Q9C0D0 580 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 HCN4Q9Y3Q4 1203 aa6.68□□□□□ -1.34
SPG11-206ENST00000558093 ACIN1Q9UKV3 1341 aaKnown RBP6.68□□□□□ -1.34
SPG11-206ENST00000558093 C21orf2O43822 256 aa6.67□□□□□ -1.34
SPG11-206ENST00000558093 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
SPG11-206ENST00000558093 NLRP8Q86W28 1048 aa6.67□□□□□ -1.34
SPG11-206ENST00000558093 NSFL1CQ9UNZ2 370 aaKnown RBP6.67□□□□□ -1.34
SPG11-206ENST00000558093 DCDC2BA2VCK2 349 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 PRMT3O60678 531 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 PPP1R15AO75807 674 aaPredicted RBP6.66□□□□□ -1.34
SPG11-206ENST00000558093 MX2P20592 715 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 HIRAP54198 1017 aaPredicted RBP6.66□□□□□ -1.34
SPG11-206ENST00000558093 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
SPG11-206ENST00000558093 KRT76Q01546 638 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 TMEM164Q5U3C3 297 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 ABHD17AQ96GS6 310 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
SPG11-206ENST00000558093 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
SPG11-206ENST00000558093 ATXN7L1Q9ULK2 861 aaPredicted RBP6.66□□□□□ -1.34
SPG11-206ENST00000558093 ATXN7O15265 892 aaPredicted RBP6.65□□□□□ -1.34
SPG11-206ENST00000558093 FOXO3O43524 673 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 THBS1P07996 1170 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 GAS6Q14393 721 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 C1orf53Q5VUE5 145 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 LRRC69Q6ZNQ3 347 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 ALDH16A1Q8IZ83 802 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 ZSCAN1Q8NBB4 408 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 PRIMPOLQ96LW4 560 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 ZIC5Q96T25 663 aa6.65□□□□□ -1.34
SPG11-206ENST00000558093 ZCCHC2Q9C0B9 1178 aaKnown RBP6.65□□□□□ -1.34
SPG11-206ENST00000558093 PCDHGC4Q9Y5F7 938 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms