RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 ZPR1O75312 459 aa13.86□□□□□ -0.19
APEX1-218ENST00000557344 NFIXQ14938 502 aa13.86□□□□□ -0.19
APEX1-218ENST00000557344 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
APEX1-218ENST00000557344 TTLL6Q8N841 843 aa13.86□□□□□ -0.19
APEX1-218ENST00000557344 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
APEX1-218ENST00000557344 NFKBIEO00221 500 aa13.85□□□□□ -0.19
APEX1-218ENST00000557344 TJP1Q07157 1748 aa13.84□□□□□ -0.19
APEX1-218ENST00000557344 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
APEX1-218ENST00000557344 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
APEX1-218ENST00000557344 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
APEX1-218ENST00000557344 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
APEX1-218ENST00000557344 SOS1Q07889 1333 aaPredicted RBP13.84□□□□□ -0.19
APEX1-218ENST00000557344 SERPINB2P05120 415 aa13.83□□□□□ -0.2
APEX1-218ENST00000557344 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
APEX1-218ENST00000557344 PANK3Q9H999 370 aa13.83□□□□□ -0.2
APEX1-218ENST00000557344 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
APEX1-218ENST00000557344 NARFQ9UHQ1 456 aa13.83□□□□□ -0.2
APEX1-218ENST00000557344 FOXN1O15353 648 aa13.82□□□□□ -0.2
APEX1-218ENST00000557344 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
APEX1-218ENST00000557344 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
APEX1-218ENST00000557344 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
APEX1-218ENST00000557344 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 NRXN2Q9P2S2 1712 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
APEX1-218ENST00000557344 H0YIN7 160 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 SLC34A2O95436 690 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
APEX1-218ENST00000557344 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
APEX1-218ENST00000557344 CCDC88AQ3V6T2 1871 aa13.8□□□□□ -0.2
APEX1-218ENST00000557344 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
APEX1-218ENST00000557344 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
APEX1-218ENST00000557344 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
APEX1-218ENST00000557344 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
APEX1-218ENST00000557344 COL15A1P39059 1388 aa13.79□□□□□ -0.2
APEX1-218ENST00000557344 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
APEX1-218ENST00000557344 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
APEX1-218ENST00000557344 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
APEX1-218ENST00000557344 ZBTB1Q9Y2K1 713 aa13.78□□□□□ -0.2
APEX1-218ENST00000557344 C21orf2O43822 256 aa13.77□□□□□ -0.21
APEX1-218ENST00000557344 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
APEX1-218ENST00000557344 SULT6B1Q6IMI4 303 aa13.77□□□□□ -0.21
APEX1-218ENST00000557344 PASKQ96RG2 1323 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
APEX1-218ENST00000557344 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.21
APEX1-218ENST00000557344 LGR6Q9HBX8 967 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
APEX1-218ENST00000557344 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
APEX1-218ENST00000557344 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
APEX1-218ENST00000557344 BRIP1Q9BX63 1249 aa13.75□□□□□ -0.21
APEX1-218ENST00000557344 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
APEX1-218ENST00000557344 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
APEX1-218ENST00000557344 PDE6BP35913 854 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 VEGFBP49765 207 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 AMER1Q5JTC6 1135 aaPredicted RBP13.74□□□□□ -0.21
APEX1-218ENST00000557344 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 WBP1LQ9NX94 342 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
APEX1-218ENST00000557344 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
APEX1-218ENST00000557344 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
APEX1-218ENST00000557344 ITGBL1O95965 494 aaPredicted RBP13.73□□□□□ -0.21
APEX1-218ENST00000557344 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
APEX1-218ENST00000557344 LBX1P52954 281 aa13.73□□□□□ -0.21
APEX1-218ENST00000557344 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
APEX1-218ENST00000557344 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
APEX1-218ENST00000557344 MRC1P22897 1456 aa13.73□□□□□ -0.21
APEX1-218ENST00000557344 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 TMEM88BA6NKF7 163 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 IL13P35225 146 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 PRR5LQ6MZQ0 368 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
APEX1-218ENST00000557344 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
APEX1-218ENST00000557344 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
APEX1-218ENST00000557344 A0A087WZG4 1122 aa13.71□□□□□ -0.21
APEX1-218ENST00000557344 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
APEX1-218ENST00000557344 ABHD8Q96I13 439 aa13.71□□□□□ -0.21
APEX1-218ENST00000557344 STARD3NLO95772 234 aa13.7□□□□□ -0.22
APEX1-218ENST00000557344 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
APEX1-218ENST00000557344 STYK1Q6J9G0 422 aa13.7□□□□□ -0.22
APEX1-218ENST00000557344 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
APEX1-218ENST00000557344 HSPA8P11142 646 aaKnown RBP13.69□□□□□ -0.22
APEX1-218ENST00000557344 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
APEX1-218ENST00000557344 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
APEX1-218ENST00000557344 COL11A2P13942 1736 aaPredicted RBP13.69□□□□□ -0.22
APEX1-218ENST00000557344 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
APEX1-218ENST00000557344 SRGNP10124 158 aa13.68□□□□□ -0.22
APEX1-218ENST00000557344 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
APEX1-218ENST00000557344 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
APEX1-218ENST00000557344 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
APEX1-218ENST00000557344 SCN4AP35499 1836 aa13.67□□□□□ -0.22
APEX1-218ENST00000557344 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms