RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 KCNA3P22001 575 aa15.21■□□□□ 0.03
HNRNPC-231ENST00000557336 AKAP4Q5JQC9 854 aa15.21■□□□□ 0.03
HNRNPC-231ENST00000557336 TJP1Q07157 1748 aa15.2■□□□□ 0.02
HNRNPC-231ENST00000557336 RFC4P35249 363 aa15.2■□□□□ 0.02
HNRNPC-231ENST00000557336 TGFB2P61812 414 aa15.2■□□□□ 0.02
HNRNPC-231ENST00000557336 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
HNRNPC-231ENST00000557336 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
HNRNPC-231ENST00000557336 DPEP1P16444 411 aa15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 DDR1Q08345 913 aa15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 C4AP0C0L4 1744 aa15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
HNRNPC-231ENST00000557336 USP42Q9H9J4 1324 aaKnown RBP15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 DNAJC10Q8IXB1 793 aa15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 MRC1P22897 1456 aa15.18■□□□□ 0.02
HNRNPC-231ENST00000557336 N4BP2Q86UW6 1770 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-231ENST00000557336 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-231ENST00000557336 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-231ENST00000557336 GPBP1L1Q9HC44 474 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-231ENST00000557336 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
HNRNPC-231ENST00000557336 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-231ENST00000557336 TM4SF1P30408 202 aa15.16■□□□□ 0.02
HNRNPC-231ENST00000557336 CCDC87Q9NVE4 849 aa15.16■□□□□ 0.02
HNRNPC-231ENST00000557336 KCPQ6ZWJ8 1503 aa15.16■□□□□ 0.02
HNRNPC-231ENST00000557336 KIF3CO14782 793 aa15.15■□□□□ 0.02
HNRNPC-231ENST00000557336 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
HNRNPC-231ENST00000557336 PARP3Q9Y6F1 533 aa15.15■□□□□ 0.02
HNRNPC-231ENST00000557336 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
HNRNPC-231ENST00000557336 NPC1L1Q9UHC9 1359 aa15.14■□□□□ 0.01
HNRNPC-231ENST00000557336 POLRMTO00411 1230 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-231ENST00000557336 IL17REQ8NFR9 667 aa15.13■□□□□ 0.01
HNRNPC-231ENST00000557336 BCL2L12Q9HB09 334 aa15.13■□□□□ 0.01
HNRNPC-231ENST00000557336 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-231ENST00000557336 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
HNRNPC-231ENST00000557336 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
HNRNPC-231ENST00000557336 FCHSD2O94868 740 aa15.11■□□□□ 0.01
HNRNPC-231ENST00000557336 CHRNA5P30532 468 aa15.11■□□□□ 0.01
HNRNPC-231ENST00000557336 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
HNRNPC-231ENST00000557336 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-231ENST00000557336 NFIXQ14938 502 aa15.1■□□□□ 0.01
HNRNPC-231ENST00000557336 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
HNRNPC-231ENST00000557336 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
HNRNPC-231ENST00000557336 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
HNRNPC-231ENST00000557336 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
HNRNPC-231ENST00000557336 HSPA6P17066 643 aa15.08■□□□□ 0
HNRNPC-231ENST00000557336 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0
HNRNPC-231ENST00000557336 COL15A1P39059 1388 aa15.08■□□□□ 0
HNRNPC-231ENST00000557336 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
HNRNPC-231ENST00000557336 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
HNRNPC-231ENST00000557336 ZPR1O75312 459 aa15.07■□□□□ 0
HNRNPC-231ENST00000557336 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
HNRNPC-231ENST00000557336 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
HNRNPC-231ENST00000557336 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
HNRNPC-231ENST00000557336 VIRMAQ69YN4 1812 aaKnown RBP15.07■□□□□ 0
HNRNPC-231ENST00000557336 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
HNRNPC-231ENST00000557336 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
HNRNPC-231ENST00000557336 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
HNRNPC-231ENST00000557336 ZNF790Q6PG37 636 aa15.06■□□□□ 0
HNRNPC-231ENST00000557336 NMRK2Q9NPI5 230 aa15.06■□□□□ 0
HNRNPC-231ENST00000557336 FBXO3Q9UK99 471 aa15.06■□□□□ 0
HNRNPC-231ENST00000557336 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
HNRNPC-231ENST00000557336 KCNQ3O43525 872 aa15.05■□□□□ -0
HNRNPC-231ENST00000557336 PRELPP51888 382 aa15.05■□□□□ -0
HNRNPC-231ENST00000557336 RSPH6AQ9H0K4 717 aa15.05■□□□□ -0
HNRNPC-231ENST00000557336 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
HNRNPC-231ENST00000557336 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
HNRNPC-231ENST00000557336 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
HNRNPC-231ENST00000557336 HEG1Q9ULI3 1381 aa15.04■□□□□ -0
HNRNPC-231ENST00000557336 SERPINB2P05120 415 aa15.04■□□□□ -0
HNRNPC-231ENST00000557336 MIER1Q8N108 512 aa15.04■□□□□ -0
HNRNPC-231ENST00000557336 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
HNRNPC-231ENST00000557336 AFDNP55196 1824 aaKnown RBP15.03■□□□□ -0
HNRNPC-231ENST00000557336 PRKAR2BP31323 418 aa15.03■□□□□ -0
HNRNPC-231ENST00000557336 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
HNRNPC-231ENST00000557336 TOMM70O94826 608 aa15.02■□□□□ -0
HNRNPC-231ENST00000557336 STARD3NLO95772 234 aa15.02■□□□□ -0
HNRNPC-231ENST00000557336 A1BGP04217 495 aa15.02■□□□□ -0
HNRNPC-231ENST00000557336 TEFQ10587 303 aa15.02■□□□□ -0
HNRNPC-231ENST00000557336 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
HNRNPC-231ENST00000557336 PCNTO95613 3336 aa15.01□□□□□ -0.01
HNRNPC-231ENST00000557336 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
HNRNPC-231ENST00000557336 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-231ENST00000557336 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
HNRNPC-231ENST00000557336 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
HNRNPC-231ENST00000557336 RASSF7Q02833 373 aa15□□□□□ -0.01
HNRNPC-231ENST00000557336 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
HNRNPC-231ENST00000557336 RNF181Q9P0P0 153 aa15□□□□□ -0.01
HNRNPC-231ENST00000557336 TBC1D2BQ9UPU7 963 aa15□□□□□ -0.01
HNRNPC-231ENST00000557336 PRAMEF22A3QJZ6 481 aa14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 SBF1O95248 1867 aa14.99□□□□□ -0.01
HNRNPC-231ENST00000557336 NFKBIEO00221 500 aa14.98□□□□□ -0.01
HNRNPC-231ENST00000557336 CAMTA2O94983 1202 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms