RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 MLLT1Q03111 559 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC6B-206ENST00000556765 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
TRAPPC6B-206ENST00000556765 POTECB2RU33 542 aa18.79■□□□□ 0.6
TRAPPC6B-206ENST00000556765 LBX1P52954 281 aa18.79■□□□□ 0.6
TRAPPC6B-206ENST00000556765 HSP90AB2PQ58FF8 381 aa18.79■□□□□ 0.6
TRAPPC6B-206ENST00000556765 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
TRAPPC6B-206ENST00000556765 TIAM2Q8IVF5 1701 aa18.78■□□□□ 0.6
TRAPPC6B-206ENST00000556765 FYB1O15117 783 aa18.78■□□□□ 0.6
TRAPPC6B-206ENST00000556765 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
TRAPPC6B-206ENST00000556765 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
TRAPPC6B-206ENST00000556765 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.6
TRAPPC6B-206ENST00000556765 DDR1Q08345 913 aa18.77■□□□□ 0.6
TRAPPC6B-206ENST00000556765 SLC4A9Q96Q91 983 aa18.77■□□□□ 0.6
TRAPPC6B-206ENST00000556765 CHADLQ6NUI6 762 aa18.76■□□□□ 0.59
TRAPPC6B-206ENST00000556765 FKBP8Q14318 412 aa18.75■□□□□ 0.59
TRAPPC6B-206ENST00000556765 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
TRAPPC6B-206ENST00000556765 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
TRAPPC6B-206ENST00000556765 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
TRAPPC6B-206ENST00000556765 FLT4P35916 1363 aa18.75■□□□□ 0.59
TRAPPC6B-206ENST00000556765 COL5A3P25940 1745 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC6B-206ENST00000556765 ZNF831Q5JPB2 1677 aa18.74■□□□□ 0.59
TRAPPC6B-206ENST00000556765 VEGFBP49765 207 aa18.74■□□□□ 0.59
TRAPPC6B-206ENST00000556765 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
TRAPPC6B-206ENST00000556765 RGS19P49795 217 aa18.73■□□□□ 0.59
TRAPPC6B-206ENST00000556765 DPY19L2Q6NUT2 758 aa18.73■□□□□ 0.59
TRAPPC6B-206ENST00000556765 HSPA8P11142 646 aaKnown RBP18.72■□□□□ 0.59
TRAPPC6B-206ENST00000556765 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
TRAPPC6B-206ENST00000556765 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
TRAPPC6B-206ENST00000556765 KIF24Q5T7B8 1368 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 CCDC85CA6NKD9 419 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 POLRMTO00411 1230 aaKnown RBP18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 PHKG2P15735 406 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 MTHFSP49914 203 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 IFNL2Q8IZJ0 200 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 ADAMTS8Q9UP79 889 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 USP42Q9H9J4 1324 aaKnown RBP18.71■□□□□ 0.59
TRAPPC6B-206ENST00000556765 MYH14Q7Z406 1995 aaKnown RBP18.7■□□□□ 0.58
TRAPPC6B-206ENST00000556765 NFKBIEO00221 500 aa18.7■□□□□ 0.58
TRAPPC6B-206ENST00000556765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.583e-9■□□□□ 10.6
TRAPPC6B-206ENST00000556765 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
TRAPPC6B-206ENST00000556765 NEFLP07196 543 aa18.69■□□□□ 0.58
TRAPPC6B-206ENST00000556765 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC6B-206ENST00000556765 PASKQ96RG2 1323 aa18.69■□□□□ 0.58
TRAPPC6B-206ENST00000556765 TNRC18O15417 2968 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC6B-206ENST00000556765 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
TRAPPC6B-206ENST00000556765 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
TRAPPC6B-206ENST00000556765 TM4SF1P30408 202 aa18.67■□□□□ 0.58
TRAPPC6B-206ENST00000556765 TTLL6Q8N841 843 aa18.67■□□□□ 0.58
TRAPPC6B-206ENST00000556765 TMEM88BA6NKF7 163 aa18.66■□□□□ 0.58
TRAPPC6B-206ENST00000556765 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
TRAPPC6B-206ENST00000556765 TNNT2P45379 298 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC6B-206ENST00000556765 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
TRAPPC6B-206ENST00000556765 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
TRAPPC6B-206ENST00000556765 ERFEQ4G0M1 354 aa18.64■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ERVV-2B6SEH9 535 aa18.63■□□□□ 0.57
TRAPPC6B-206ENST00000556765 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
TRAPPC6B-206ENST00000556765 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
TRAPPC6B-206ENST00000556765 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
TRAPPC6B-206ENST00000556765 MAP2K1Q02750 393 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
TRAPPC6B-206ENST00000556765 DDNO94850 711 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC6B-206ENST00000556765 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
TRAPPC6B-206ENST00000556765 EYA1Q99502 592 aa18.61■□□□□ 0.57
TRAPPC6B-206ENST00000556765 RASSF10A6NK89 507 aa18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ZPR1O75312 459 aa18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 USPL1Q5W0Q7 1092 aa18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 DICER1Q9UPY3 1922 aaKnown RBP18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
TRAPPC6B-206ENST00000556765 IQCA1LA6NCM1 817 aa18.59■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ITGBL1O95965 494 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC6B-206ENST00000556765 DEFB115Q30KQ5 88 aa18.59■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ADAMTS7Q9UKP4 1686 aa18.59■□□□□ 0.57
TRAPPC6B-206ENST00000556765 NRXN2Q9P2S2 1712 aa18.58■□□□□ 0.57
TRAPPC6B-206ENST00000556765 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
TRAPPC6B-206ENST00000556765 H0YIN7 160 aa18.58■□□□□ 0.56
TRAPPC6B-206ENST00000556765 PPM1GO15355 546 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC6B-206ENST00000556765 NFIXQ14938 502 aa18.58■□□□□ 0.56
TRAPPC6B-206ENST00000556765 CFAP44Q96MT7 982 aa18.58■□□□□ 0.56
TRAPPC6B-206ENST00000556765 WDR33Q9C0J8 1336 aaKnown RBP18.57■□□□□ 0.56
TRAPPC6B-206ENST00000556765 CABP4P57796 275 aa18.57■□□□□ 0.56
TRAPPC6B-206ENST00000556765 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
TRAPPC6B-206ENST00000556765 TAF1DQ9H5J8 278 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC6B-206ENST00000556765 SERPINB2P05120 415 aa18.56■□□□□ 0.56
TRAPPC6B-206ENST00000556765 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
TRAPPC6B-206ENST00000556765 INTS5Q6P9B9 1019 aaKnown RBP18.56■□□□□ 0.56
TRAPPC6B-206ENST00000556765 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC6B-206ENST00000556765 TJP1Q07157 1748 aa18.56■□□□□ 0.56
TRAPPC6B-206ENST00000556765 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 FER1L6Q2WGJ9 1857 aa18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 C21orf2O43822 256 aa18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 NEFMP07197 916 aa18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms