RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 C5P01031 1676 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 TJP1Q07157 1748 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
ABCD4-225ENST00000556517 VAMP4O75379 141 aa16.06■□□□□ 0.16
ABCD4-225ENST00000556517 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-225ENST00000556517 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-225ENST00000556517 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
ABCD4-225ENST00000556517 EZH2Q15910 746 aaKnown RBP16.06■□□□□ 0.16
ABCD4-225ENST00000556517 DEFB132Q7Z7B7 95 aa16.06■□□□□ 0.16
ABCD4-225ENST00000556517 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
ABCD4-225ENST00000556517 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-225ENST00000556517 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
ABCD4-225ENST00000556517 LINC00116Q8NCU8 138 aa16.05■□□□□ 0.16
ABCD4-225ENST00000556517 AK7Q96M32 723 aa16.05■□□□□ 0.16
ABCD4-225ENST00000556517 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
ABCD4-225ENST00000556517 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
ABCD4-225ENST00000556517 SMC4Q9NTJ3 1288 aa16.04■□□□□ 0.16
ABCD4-225ENST00000556517 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
ABCD4-225ENST00000556517 GNPATO15228 680 aa16.03■□□□□ 0.16
ABCD4-225ENST00000556517 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
ABCD4-225ENST00000556517 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
ABCD4-225ENST00000556517 PROM2Q8N271 834 aa16.03■□□□□ 0.16
ABCD4-225ENST00000556517 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
ABCD4-225ENST00000556517 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
ABCD4-225ENST00000556517 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
ABCD4-225ENST00000556517 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
ABCD4-225ENST00000556517 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.16
ABCD4-225ENST00000556517 A1BGP04217 495 aa16.02■□□□□ 0.16
ABCD4-225ENST00000556517 MYL6BP14649 208 aa16.02■□□□□ 0.16
ABCD4-225ENST00000556517 DDX21Q9NR30 783 aaKnown RBP eCLIP16.02■□□□□ 0.16
ABCD4-225ENST00000556517 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 TCERG1O14776 1098 aaKnown RBP16.01■□□□□ 0.15
ABCD4-225ENST00000556517 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 RARSP54136 660 aaKnown RBP16.01■□□□□ 0.15
ABCD4-225ENST00000556517 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 INTS5Q6P9B9 1019 aaKnown RBP16.01■□□□□ 0.15
ABCD4-225ENST00000556517 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
ABCD4-225ENST00000556517 RREB1Q92766 1687 aa16.01■□□□□ 0.15
ABCD4-225ENST00000556517 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
ABCD4-225ENST00000556517 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
ABCD4-225ENST00000556517 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
ABCD4-225ENST00000556517 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
ABCD4-225ENST00000556517 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-225ENST00000556517 ARXQ96QS3 562 aa15.99■□□□□ 0.15
ABCD4-225ENST00000556517 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 A0A087WZG4 1122 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
ABCD4-225ENST00000556517 ADRA2BP18089 450 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 PDIA6Q15084 440 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 NBPF10Q6P3W6 841 aaKnown RBP15.98■□□□□ 0.15
ABCD4-225ENST00000556517 KIF6Q6ZMV9 814 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 COL15A1P39059 1388 aa15.98■□□□□ 0.15
ABCD4-225ENST00000556517 NUP188Q5SRE5 1749 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 PHF14O94880 888 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 ANXA1P04083 346 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 SSFA2P28290 1259 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 PROSER3Q2NL68 480 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
ABCD4-225ENST00000556517 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 FLIIQ13045 1269 aa15.96■□□□□ 0.15
ABCD4-225ENST00000556517 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
ABCD4-225ENST00000556517 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
ABCD4-225ENST00000556517 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
ABCD4-225ENST00000556517 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
ABCD4-225ENST00000556517 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
ABCD4-225ENST00000556517 PTPRCP08575 1304 aa15.95■□□□□ 0.14
ABCD4-225ENST00000556517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
ABCD4-225ENST00000556517 RFC4P35249 363 aa15.95■□□□□ 0.14
ABCD4-225ENST00000556517 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
ABCD4-225ENST00000556517 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
ABCD4-225ENST00000556517 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
ABCD4-225ENST00000556517 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
ABCD4-225ENST00000556517 MSH5O43196 834 aa15.94■□□□□ 0.14
ABCD4-225ENST00000556517 ZPR1O75312 459 aa15.94■□□□□ 0.14
ABCD4-225ENST00000556517 BCAR3O75815 825 aa15.94■□□□□ 0.14
ABCD4-225ENST00000556517 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
ABCD4-225ENST00000556517 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
ABCD4-225ENST00000556517 LRP10Q7Z4F1 713 aa15.93■□□□□ 0.14
ABCD4-225ENST00000556517 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
ABCD4-225ENST00000556517 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
ABCD4-225ENST00000556517 ZNF652Q9Y2D9 606 aa15.93■□□□□ 0.14
ABCD4-225ENST00000556517 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
ABCD4-225ENST00000556517 ANKRD13DQ6ZTN6 518 aa15.92■□□□□ 0.14
ABCD4-225ENST00000556517 G2E3Q7L622 706 aa15.92■□□□□ 0.14
ABCD4-225ENST00000556517 API5Q9BZZ5 524 aaKnown RBP15.92■□□□□ 0.14
ABCD4-225ENST00000556517 TBC1D2BQ9UPU7 963 aa15.92■□□□□ 0.14
ABCD4-225ENST00000556517 SOCS7O14512 581 aa15.91■□□□□ 0.14
ABCD4-225ENST00000556517 TTLL7Q6ZT98 887 aa15.91■□□□□ 0.14
ABCD4-225ENST00000556517 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
ABCD4-225ENST00000556517 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms