RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GLTPD2A6NH11 291 aa14.49□□□□□ -0.09
SRP54-205ENST00000554803 ADRA2BP18089 450 aa14.49□□□□□ -0.09
SRP54-205ENST00000554803 FAM161AQ3B820 660 aa14.49□□□□□ -0.09
SRP54-205ENST00000554803 ASAP1Q9ULH1 1129 aa14.49□□□□□ -0.09
SRP54-205ENST00000554803 KDRP35968 1356 aa14.48□□□□□ -0.09
SRP54-205ENST00000554803 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
SRP54-205ENST00000554803 AFDNP55196 1824 aaKnown RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 RRP1P56182 461 aaKnown RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 RRS1Q15050 365 aaKnown RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
SRP54-205ENST00000554803 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
SRP54-205ENST00000554803 PDE4DIPQ5VU43 2346 aa14.47□□□□□ -0.09
SRP54-205ENST00000554803 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
SRP54-205ENST00000554803 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
SRP54-205ENST00000554803 TMOD3Q9NYL9 352 aa14.47□□□□□ -0.09
SRP54-205ENST00000554803 MKRN1Q9UHC7 482 aaKnown RBP14.47□□□□□ -0.09
SRP54-205ENST00000554803 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
SRP54-205ENST00000554803 RASSF7Q02833 373 aa14.46□□□□□ -0.09
SRP54-205ENST00000554803 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
SRP54-205ENST00000554803 RCAN3Q9UKA8 241 aa14.46□□□□□ -0.09
SRP54-205ENST00000554803 NCAPD2Q15021 1401 aa14.46□□□□□ -0.09
SRP54-205ENST00000554803 RFC4P35249 363 aa14.45□□□□□ -0.1
SRP54-205ENST00000554803 CTCFP49711 727 aaPredicted RBP14.45□□□□□ -0.1
SRP54-205ENST00000554803 ATG3Q9NT62 314 aa14.45□□□□□ -0.1
SRP54-205ENST00000554803 POTECB2RU33 542 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 LMNB1P20700 586 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 CHRNA5P30532 468 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 FLT4P35916 1363 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 KIF24Q5T7B8 1368 aa14.44□□□□□ -0.1
SRP54-205ENST00000554803 CNTNAP4Q9C0A0 1308 aa14.43□□□□□ -0.1
SRP54-205ENST00000554803 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
SRP54-205ENST00000554803 ABHD8Q96I13 439 aa14.43□□□□□ -0.1
SRP54-205ENST00000554803 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
SRP54-205ENST00000554803 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
SRP54-205ENST00000554803 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
SRP54-205ENST00000554803 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
SRP54-205ENST00000554803 AIDAQ96BJ3 306 aa14.42□□□□□ -0.1
SRP54-205ENST00000554803 SLC4A9Q96Q91 983 aa14.42□□□□□ -0.1
SRP54-205ENST00000554803 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
SRP54-205ENST00000554803 FYB1O15117 783 aa14.41□□□□□ -0.1
SRP54-205ENST00000554803 DDR1Q08345 913 aa14.41□□□□□ -0.1
SRP54-205ENST00000554803 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
SRP54-205ENST00000554803 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
SRP54-205ENST00000554803 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
SRP54-205ENST00000554803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.4□□□□□ -0.1
SRP54-205ENST00000554803 TNRC18O15417 2968 aaPredicted RBP14.4□□□□□ -0.1
SRP54-205ENST00000554803 SCN4AP35499 1836 aa14.39□□□□□ -0.11
SRP54-205ENST00000554803 RGS19P49795 217 aa14.39□□□□□ -0.11
SRP54-205ENST00000554803 LBX1P52954 281 aa14.39□□□□□ -0.11
SRP54-205ENST00000554803 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
SRP54-205ENST00000554803 USP42Q9H9J4 1324 aaKnown RBP14.39□□□□□ -0.11
SRP54-205ENST00000554803 TJP1Q07157 1748 aa14.38□□□□□ -0.11
SRP54-205ENST00000554803 PHKG2P15735 406 aa14.38□□□□□ -0.11
SRP54-205ENST00000554803 IFNL2Q8IZJ0 200 aa14.38□□□□□ -0.11
SRP54-205ENST00000554803 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
SRP54-205ENST00000554803 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
SRP54-205ENST00000554803 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
SRP54-205ENST00000554803 DPY19L2Q6NUT2 758 aa14.37□□□□□ -0.11
SRP54-205ENST00000554803 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.37□□□□□ -0.11
SRP54-205ENST00000554803 NFKBIEO00221 500 aa14.36□□□□□ -0.11
SRP54-205ENST00000554803 TNNT2P45379 298 aaPredicted RBP14.36□□□□□ -0.11
SRP54-205ENST00000554803 VEGFBP49765 207 aa14.36□□□□□ -0.11
SRP54-205ENST00000554803 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
SRP54-205ENST00000554803 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
SRP54-205ENST00000554803 PASKQ96RG2 1323 aa14.36□□□□□ -0.11
SRP54-205ENST00000554803 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
SRP54-205ENST00000554803 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
SRP54-205ENST00000554803 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
SRP54-205ENST00000554803 TM4SF1P30408 202 aa14.35□□□□□ -0.11
SRP54-205ENST00000554803 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
SRP54-205ENST00000554803 ANKRD31Q8N7Z5 1873 aa14.34□□□□□ -0.11
SRP54-205ENST00000554803 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
SRP54-205ENST00000554803 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
SRP54-205ENST00000554803 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
SRP54-205ENST00000554803 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
SRP54-205ENST00000554803 TTLL6Q8N841 843 aa14.33□□□□□ -0.12
SRP54-205ENST00000554803 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
SRP54-205ENST00000554803 CRKLP46109 303 aaKnown RBP14.32□□□□□ -0.12
SRP54-205ENST00000554803 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
SRP54-205ENST00000554803 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
SRP54-205ENST00000554803 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
SRP54-205ENST00000554803 CCDC85CA6NKD9 419 aa14.31□□□□□ -0.12
SRP54-205ENST00000554803 RTL5Q5HYW3 569 aaPredicted RBP14.31□□□□□ -0.12
SRP54-205ENST00000554803 EYA1Q99502 592 aa14.31□□□□□ -0.12
SRP54-205ENST00000554803 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
SRP54-205ENST00000554803 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
SRP54-205ENST00000554803 AAMPQ13685 434 aa14.3□□□□□ -0.12
SRP54-205ENST00000554803 WDR43Q15061 677 aaKnown RBP eCLIP14.3□□□□□ -0.12
SRP54-205ENST00000554803 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
SRP54-205ENST00000554803 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
SRP54-205ENST00000554803 ERFEQ4G0M1 354 aa14.29□□□□□ -0.12
SRP54-205ENST00000554803 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
SRP54-205ENST00000554803 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
SRP54-205ENST00000554803 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 ZPR1O75312 459 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms