RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
APEX1-205ENST00000553555 SBF2Q86WG5 1849 aa17.5■□□□□ 0.39
APEX1-205ENST00000553555 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
APEX1-205ENST00000553555 FLIIQ13045 1269 aa17.5■□□□□ 0.39
APEX1-205ENST00000553555 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
APEX1-205ENST00000553555 ABCC4O15439 1325 aa17.49■□□□□ 0.39
APEX1-205ENST00000553555 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
APEX1-205ENST00000553555 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
APEX1-205ENST00000553555 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
APEX1-205ENST00000553555 RGS12O14924 1447 aa17.49■□□□□ 0.39
APEX1-205ENST00000553555 PDIA6Q15084 440 aa17.48■□□□□ 0.39
APEX1-205ENST00000553555 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
APEX1-205ENST00000553555 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
APEX1-205ENST00000553555 KCNQ2O43526 872 aa17.47■□□□□ 0.39
APEX1-205ENST00000553555 ANXA1P04083 346 aa17.47■□□□□ 0.39
APEX1-205ENST00000553555 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
APEX1-205ENST00000553555 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
APEX1-205ENST00000553555 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
APEX1-205ENST00000553555 AAMPQ13685 434 aa17.46■□□□□ 0.39
APEX1-205ENST00000553555 PROSER3Q2NL68 480 aa17.46■□□□□ 0.39
APEX1-205ENST00000553555 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
APEX1-205ENST00000553555 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
APEX1-205ENST00000553555 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
APEX1-205ENST00000553555 NHSQ6T4R5 1651 aa17.46■□□□□ 0.39
APEX1-205ENST00000553555 FAM182BQ5T319 152 aa17.45■□□□□ 0.38
APEX1-205ENST00000553555 BTAF1O14981 1849 aa17.45■□□□□ 0.38
APEX1-205ENST00000553555 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
APEX1-205ENST00000553555 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
APEX1-205ENST00000553555 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
APEX1-205ENST00000553555 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
APEX1-205ENST00000553555 N4BP2Q86UW6 1770 aaPredicted RBP17.44■□□□□ 0.38
APEX1-205ENST00000553555 F6X3S4 739 aa17.43■□□□□ 0.38
APEX1-205ENST00000553555 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
APEX1-205ENST00000553555 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
APEX1-205ENST00000553555 TJP1Q07157 1748 aa17.43■□□□□ 0.38
APEX1-205ENST00000553555 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
APEX1-205ENST00000553555 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
APEX1-205ENST00000553555 MYL6BP14649 208 aa17.42■□□□□ 0.38
APEX1-205ENST00000553555 RXRBP28702 533 aa17.42■□□□□ 0.38
APEX1-205ENST00000553555 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
APEX1-205ENST00000553555 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
APEX1-205ENST00000553555 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
APEX1-205ENST00000553555 A1BGP04217 495 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
APEX1-205ENST00000553555 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
APEX1-205ENST00000553555 CICQ96RK0 1608 aaPredicted RBP17.4■□□□□ 0.38
APEX1-205ENST00000553555 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
APEX1-205ENST00000553555 STARD3NLO95772 234 aa17.4■□□□□ 0.38
APEX1-205ENST00000553555 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
APEX1-205ENST00000553555 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
APEX1-205ENST00000553555 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
APEX1-205ENST00000553555 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
APEX1-205ENST00000553555 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.38
APEX1-205ENST00000553555 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.38
APEX1-205ENST00000553555 KSR2Q6VAB6 950 aa17.39■□□□□ 0.38
APEX1-205ENST00000553555 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.38
APEX1-205ENST00000553555 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.38
APEX1-205ENST00000553555 ADCY9O60503 1353 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
APEX1-205ENST00000553555 SIK1P57059 783 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
APEX1-205ENST00000553555 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
APEX1-205ENST00000553555 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
APEX1-205ENST00000553555 ATP6V1AP38606 617 aa17.37■□□□□ 0.37
APEX1-205ENST00000553555 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
APEX1-205ENST00000553555 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
APEX1-205ENST00000553555 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
APEX1-205ENST00000553555 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
APEX1-205ENST00000553555 LY75O60449 1722 aa17.36■□□□□ 0.37
APEX1-205ENST00000553555 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
APEX1-205ENST00000553555 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 ITPK1Q13572 414 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
APEX1-205ENST00000553555 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
APEX1-205ENST00000553555 RREB1Q92766 1687 aa17.34■□□□□ 0.37
APEX1-205ENST00000553555 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
APEX1-205ENST00000553555 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
APEX1-205ENST00000553555 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
APEX1-205ENST00000553555 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
APEX1-205ENST00000553555 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
APEX1-205ENST00000553555 MEIS3Q99687 375 aa17.32■□□□□ 0.36
APEX1-205ENST00000553555 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
APEX1-205ENST00000553555 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
APEX1-205ENST00000553555 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
APEX1-205ENST00000553555 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
APEX1-205ENST00000553555 IGHDP01880 384 aa17.31■□□□□ 0.36
APEX1-205ENST00000553555 CRKLP46109 303 aaKnown RBP17.31■□□□□ 0.36
APEX1-205ENST00000553555 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms