RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TNS2Q63HR2 1409 aa10.6□□□□□ -0.71
ATXN3-219ENST00000553488 LTN1O94822 1766 aa10.6□□□□□ -0.71
ATXN3-219ENST00000553488 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
ATXN3-219ENST00000553488 SRPK2P78362 688 aaKnown RBP10.59□□□□□ -0.71
ATXN3-219ENST00000553488 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
ATXN3-219ENST00000553488 ZBTB7AO95365 584 aa10.58□□□□□ -0.72
ATXN3-219ENST00000553488 PRSS12P56730 875 aa10.58□□□□□ -0.72
ATXN3-219ENST00000553488 TOM1L2Q6ZVM7 507 aa10.58□□□□□ -0.72
ATXN3-219ENST00000553488 TTC13Q8NBP0 860 aa10.58□□□□□ -0.72
ATXN3-219ENST00000553488 KIAA1468Q9P260 1216 aa10.58□□□□□ -0.72
ATXN3-219ENST00000553488 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
ATXN3-219ENST00000553488 KAT6BQ8WYB5 2073 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 ZBTB7CA1YPR0 619 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 TXNRD1Q16881 649 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-219ENST00000553488 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-219ENST00000553488 CABP1Q9NZU7 370 aa10.57□□□□□ -0.72
ATXN3-219ENST00000553488 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
ATXN3-219ENST00000553488 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
ATXN3-219ENST00000553488 FHDC1Q9C0D6 1143 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-219ENST00000553488 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
ATXN3-219ENST00000553488 CCDC7Q96M83 1385 aa10.55□□□□□ -0.72
ATXN3-219ENST00000553488 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
ATXN3-219ENST00000553488 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
ATXN3-219ENST00000553488 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
ATXN3-219ENST00000553488 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
ATXN3-219ENST00000553488 TTC21BQ7Z4L5 1316 aa10.55□□□□□ -0.72
ATXN3-219ENST00000553488 PTGDRQ13258 359 aa10.54□□□□□ -0.72
ATXN3-219ENST00000553488 SHANK3Q9BYB0 1731 aa10.54□□□□□ -0.72
ATXN3-219ENST00000553488 MTFR1LQ9H019 292 aa10.54□□□□□ -0.72
ATXN3-219ENST00000553488 STK32BQ9NY57 414 aa10.54□□□□□ -0.72
ATXN3-219ENST00000553488 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
ATXN3-219ENST00000553488 LY75O60449 1722 aa10.53□□□□□ -0.72
ATXN3-219ENST00000553488 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
ATXN3-219ENST00000553488 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
ATXN3-219ENST00000553488 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
ATXN3-219ENST00000553488 KCNH5Q8NCM2 988 aa10.52□□□□□ -0.73
ATXN3-219ENST00000553488 CD163L1Q9NR16 1453 aa10.52□□□□□ -0.73
ATXN3-219ENST00000553488 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
ATXN3-219ENST00000553488 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
ATXN3-219ENST00000553488 EVC2Q86UK5 1308 aa10.51□□□□□ -0.73
ATXN3-219ENST00000553488 EXOC5O00471 708 aa10.5□□□□□ -0.73
ATXN3-219ENST00000553488 CSB-PGBD3P0DP91 1061 aa10.5□□□□□ -0.73
ATXN3-219ENST00000553488 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
ATXN3-219ENST00000553488 SMYD5Q6GMV2 418 aa10.5□□□□□ -0.73
ATXN3-219ENST00000553488 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
ATXN3-219ENST00000553488 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
ATXN3-219ENST00000553488 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
ATXN3-219ENST00000553488 GPR37O15354 613 aa10.49□□□□□ -0.73
ATXN3-219ENST00000553488 ARXQ96QS3 562 aa10.49□□□□□ -0.73
ATXN3-219ENST00000553488 SEPT9Q9UHD8 586 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-219ENST00000553488 KTN1Q86UP2 1357 aaKnown RBP10.49□□□□□ -0.73
ATXN3-219ENST00000553488 SBNO2Q9Y2G9 1366 aa10.49□□□□□ -0.73
ATXN3-219ENST00000553488 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 C1QTNF8P60827 252 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 THSD4Q6ZMP0 1018 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 ACSBG1Q96GR2 724 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
ATXN3-219ENST00000553488 LRRC4BQ9NT99 713 aa10.48□□□□□ -0.73
ATXN3-219ENST00000553488 TATDN2Q93075 761 aa10.47□□□□□ -0.73
ATXN3-219ENST00000553488 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
ATXN3-219ENST00000553488 IL2RBP14784 551 aa10.46□□□□□ -0.73
ATXN3-219ENST00000553488 WNT2BQ93097 391 aa10.46□□□□□ -0.73
ATXN3-219ENST00000553488 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
ATXN3-219ENST00000553488 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.74
ATXN3-219ENST00000553488 TAF1LQ8IZX4 1826 aa10.46□□□□□ -0.74
ATXN3-219ENST00000553488 NSD2O96028 1365 aa10.45□□□□□ -0.74
ATXN3-219ENST00000553488 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
ATXN3-219ENST00000553488 C5P01031 1676 aa10.44□□□□□ -0.74
ATXN3-219ENST00000553488 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
ATXN3-219ENST00000553488 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
ATXN3-219ENST00000553488 FCHSD2O94868 740 aa10.44□□□□□ -0.74
ATXN3-219ENST00000553488 NME9Q86XW9 330 aa10.44□□□□□ -0.74
ATXN3-219ENST00000553488 NLRP2Q9NX02 1062 aa10.44□□□□□ -0.74
ATXN3-219ENST00000553488 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 SMAPO00193 183 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 ANKRD24Q8TF21 1146 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 EYA1Q99502 592 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
ATXN3-219ENST00000553488 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
ATXN3-219ENST00000553488 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
ATXN3-219ENST00000553488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATXN3-219ENST00000553488 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
ATXN3-219ENST00000553488 NLGN2Q8NFZ4 835 aa10.42□□□□□ -0.74
ATXN3-219ENST00000553488 MEGF6O75095 1541 aa10.42□□□□□ -0.74
ATXN3-219ENST00000553488 ANKRD36BQ8N2N9 1353 aa10.41□□□□□ -0.74
ATXN3-219ENST00000553488 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-219ENST00000553488 HIC1Q14526 733 aa10.41□□□□□ -0.74
ATXN3-219ENST00000553488 GPR162Q16538 588 aa10.41□□□□□ -0.74
ATXN3-219ENST00000553488 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.75
ATXN3-219ENST00000553488 ITGB4P16144 1822 aa10.4□□□□□ -0.75
ATXN3-219ENST00000553488 YBX3P16989 372 aaKnown RBP eCLIP10.39□□□□□ -0.75
ATXN3-219ENST00000553488 POLD1P28340 1107 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 572.1 ms