RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 EYA1Q99502 592 aa16.62■□□□□ 0.25
SNRPF-205ENST00000553192 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
SNRPF-205ENST00000553192 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
SNRPF-205ENST00000553192 LDHDQ86WU2 507 aa16.61■□□□□ 0.25
SNRPF-205ENST00000553192 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
SNRPF-205ENST00000553192 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
SNRPF-205ENST00000553192 ERVV-2B6SEH9 535 aa16.6■□□□□ 0.25
SNRPF-205ENST00000553192 MAP2K1Q02750 393 aaPredicted RBP16.6■□□□□ 0.25
SNRPF-205ENST00000553192 NFIXQ14938 502 aa16.6■□□□□ 0.25
SNRPF-205ENST00000553192 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
SNRPF-205ENST00000553192 INTS5Q6P9B9 1019 aaKnown RBP16.6■□□□□ 0.25
SNRPF-205ENST00000553192 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
SNRPF-205ENST00000553192 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
SNRPF-205ENST00000553192 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
SNRPF-205ENST00000553192 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
SNRPF-205ENST00000553192 TESK2Q96S53 571 aa16.59■□□□□ 0.25
SNRPF-205ENST00000553192 TAF1DQ9H5J8 278 aaPredicted RBP16.59■□□□□ 0.25
SNRPF-205ENST00000553192 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SNRPF-205ENST00000553192 TNRC18O15417 2968 aaPredicted RBP16.59■□□□□ 0.25
SNRPF-205ENST00000553192 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.24
SNRPF-205ENST00000553192 NRXN2Q9P2S2 1712 aa16.58■□□□□ 0.24
SNRPF-205ENST00000553192 C21orf2O43822 256 aa16.56■□□□□ 0.24
SNRPF-205ENST00000553192 SERPINB2P05120 415 aa16.56■□□□□ 0.24
SNRPF-205ENST00000553192 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
SNRPF-205ENST00000553192 BCL2L12Q9HB09 334 aa16.56■□□□□ 0.24
SNRPF-205ENST00000553192 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
SNRPF-205ENST00000553192 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
SNRPF-205ENST00000553192 H0YIN7 160 aa16.55■□□□□ 0.24
SNRPF-205ENST00000553192 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
SNRPF-205ENST00000553192 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
SNRPF-205ENST00000553192 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
SNRPF-205ENST00000553192 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
SNRPF-205ENST00000553192 ZPR1O75312 459 aa16.54■□□□□ 0.24
SNRPF-205ENST00000553192 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
SNRPF-205ENST00000553192 TJP1Q07157 1748 aa16.53■□□□□ 0.24
SNRPF-205ENST00000553192 SOS1Q07889 1333 aaPredicted RBP16.53■□□□□ 0.24
SNRPF-205ENST00000553192 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
SNRPF-205ENST00000553192 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
SNRPF-205ENST00000553192 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
SNRPF-205ENST00000553192 CABP4P57796 275 aa16.52■□□□□ 0.24
SNRPF-205ENST00000553192 TAOK3Q9H2K8 898 aa16.52■□□□□ 0.24
SNRPF-205ENST00000553192 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
SNRPF-205ENST00000553192 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
SNRPF-205ENST00000553192 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
SNRPF-205ENST00000553192 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.23
SNRPF-205ENST00000553192 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
SNRPF-205ENST00000553192 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
SNRPF-205ENST00000553192 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
SNRPF-205ENST00000553192 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
SNRPF-205ENST00000553192 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
SNRPF-205ENST00000553192 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
SNRPF-205ENST00000553192 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.231e-8■□□□□ 10.8
SNRPF-205ENST00000553192 ABT1Q9ULW3 272 aaKnown RBP16.5■□□□□ 0.23
SNRPF-205ENST00000553192 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
SNRPF-205ENST00000553192 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
SNRPF-205ENST00000553192 CAPNS2Q96L46 248 aa16.49■□□□□ 0.23
SNRPF-205ENST00000553192 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
SNRPF-205ENST00000553192 SCN4AP35499 1836 aa16.48■□□□□ 0.23
SNRPF-205ENST00000553192 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
SNRPF-205ENST00000553192 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
SNRPF-205ENST00000553192 EPHX2P34913 555 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 FMR1Q06787 632 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPF-205ENST00000553192 CYP4F22Q6NT55 531 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 LTBP1Q14766 1721 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
SNRPF-205ENST00000553192 CYP19A1P11511 503 aaPredicted RBP16.46■□□□□ 0.23
SNRPF-205ENST00000553192 EIF4A2Q14240 407 aaKnown RBP16.46■□□□□ 0.23
SNRPF-205ENST00000553192 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
SNRPF-205ENST00000553192 GPR101Q96P66 508 aaPredicted RBP16.46■□□□□ 0.23
SNRPF-205ENST00000553192 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
SNRPF-205ENST00000553192 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
SNRPF-205ENST00000553192 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNRPF-205ENST00000553192 COL15A1P39059 1388 aa16.46■□□□□ 0.23
SNRPF-205ENST00000553192 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.22
SNRPF-205ENST00000553192 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
SNRPF-205ENST00000553192 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
SNRPF-205ENST00000553192 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
SNRPF-205ENST00000553192 ZBTB1Q9Y2K1 713 aa16.45■□□□□ 0.22
SNRPF-205ENST00000553192 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
SNRPF-205ENST00000553192 ECE1P42892 770 aa16.44■□□□□ 0.22
SNRPF-205ENST00000553192 MTHFSP49914 203 aa16.44■□□□□ 0.22
SNRPF-205ENST00000553192 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
SNRPF-205ENST00000553192 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
SNRPF-205ENST00000553192 GRM1Q13255 1194 aa16.43■□□□□ 0.22
SNRPF-205ENST00000553192 DGKZQ13574 1117 aa16.43■□□□□ 0.22
SNRPF-205ENST00000553192 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
SNRPF-205ENST00000553192 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
SNRPF-205ENST00000553192 PRR5LQ6MZQ0 368 aa16.43■□□□□ 0.22
SNRPF-205ENST00000553192 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
SNRPF-205ENST00000553192 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
SNRPF-205ENST00000553192 AOC2O75106 756 aa16.42■□□□□ 0.22
SNRPF-205ENST00000553192 PDE6BP35913 854 aa16.42■□□□□ 0.22
SNRPF-205ENST00000553192 CST9Q5W186 159 aa16.42■□□□□ 0.22
SNRPF-205ENST00000553192 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
SNRPF-205ENST00000553192 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
SNRPF-205ENST00000553192 C7orf43Q8WVR3 580 aa16.42■□□□□ 0.22
SNRPF-205ENST00000553192 SLX4Q8IY92 1834 aa16.41■□□□□ 0.22
SNRPF-205ENST00000553192 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms