RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 COG3Q96JB2 828 aa19.3■□□□□ 0.68
SNRPF-203ENST00000551316 INSRP06213 1382 aa19.3■□□□□ 0.68
SNRPF-203ENST00000551316 RASSF10A6NK89 507 aa19.29■□□□□ 0.68
SNRPF-203ENST00000551316 MCOLN1Q9GZU1 580 aa19.28■□□□□ 0.68
SNRPF-203ENST00000551316 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
SNRPF-203ENST00000551316 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.68
SNRPF-203ENST00000551316 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.67
SNRPF-203ENST00000551316 TM4SF1P30408 202 aa19.26■□□□□ 0.67
SNRPF-203ENST00000551316 RBM42Q9BTD8 480 aaKnown RBP19.26■□□□□ 0.67
SNRPF-203ENST00000551316 SLX4Q8IY92 1834 aa19.25■□□□□ 0.67
SNRPF-203ENST00000551316 LDHDQ86WU2 507 aa19.24■□□□□ 0.67
SNRPF-203ENST00000551316 FLT4P35916 1363 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 PHKG2P15735 406 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 DPY19L2Q6NUT2 758 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
SNRPF-203ENST00000551316 TRPM7Q96QT4 1865 aa19.22■□□□□ 0.67
SNRPF-203ENST00000551316 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
SNRPF-203ENST00000551316 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
SNRPF-203ENST00000551316 TAF1DQ9H5J8 278 aaPredicted RBP19.22■□□□□ 0.67
SNRPF-203ENST00000551316 ZNF219Q9P2Y4 722 aaPredicted RBP19.22■□□□□ 0.67
SNRPF-203ENST00000551316 CRKLP46109 303 aaKnown RBP19.21■□□□□ 0.67
SNRPF-203ENST00000551316 FMR1Q06787 632 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNRPF-203ENST00000551316 TTLL6Q8N841 843 aa19.21■□□□□ 0.67
SNRPF-203ENST00000551316 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
SNRPF-203ENST00000551316 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
SNRPF-203ENST00000551316 C2CD5Q86YS7 1000 aa19.19■□□□□ 0.66
SNRPF-203ENST00000551316 SOX10P56693 466 aa19.18■□□□□ 0.66
SNRPF-203ENST00000551316 NFIXQ14938 502 aa19.18■□□□□ 0.66
SNRPF-203ENST00000551316 MAP1SQ66K74 1059 aaPredicted RBP19.18■□□□□ 0.66
SNRPF-203ENST00000551316 C21orf2O43822 256 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 EAPPQ56P03 285 aaPredicted RBP19.17■□□□□ 0.66
SNRPF-203ENST00000551316 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 SPG7Q9UQ90 795 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 EMILIN1Q9Y6C2 1016 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 TONSLQ96HA7 1378 aa19.17■□□□□ 0.66
SNRPF-203ENST00000551316 GRM1Q13255 1194 aa19.16■□□□□ 0.66
SNRPF-203ENST00000551316 PRPF38BQ5VTL8 546 aaKnown RBP19.16■□□□□ 0.66
SNRPF-203ENST00000551316 L3MBTL3Q96JM7 780 aaPredicted RBP19.16■□□□□ 0.66
SNRPF-203ENST00000551316 CAPNS2Q96L46 248 aa19.16■□□□□ 0.66
SNRPF-203ENST00000551316 ABT1Q9ULW3 272 aaKnown RBP19.16■□□□□ 0.66
SNRPF-203ENST00000551316 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
SNRPF-203ENST00000551316 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
SNRPF-203ENST00000551316 BCL2L12Q9HB09 334 aa19.15■□□□□ 0.66
SNRPF-203ENST00000551316 FYB1O15117 783 aa19.14■□□□□ 0.65
SNRPF-203ENST00000551316 AOC2O75106 756 aa19.14■□□□□ 0.65
SNRPF-203ENST00000551316 IFNL2Q8IZJ0 200 aa19.14■□□□□ 0.65
SNRPF-203ENST00000551316 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
SNRPF-203ENST00000551316 DGKZQ13574 1117 aa19.13■□□□□ 0.65
SNRPF-203ENST00000551316 BCORQ6W2J9 1755 aa19.12■□□□□ 0.65
SNRPF-203ENST00000551316 SCN11AQ9UI33 1791 aa19.12■□□□□ 0.65
SNRPF-203ENST00000551316 LTBP3Q9NS15 1303 aa19.12■□□□□ 0.65
SNRPF-203ENST00000551316 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
SNRPF-203ENST00000551316 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 SERPINB2P05120 415 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 CNTROBQ8N137 903 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 CCDC24Q8N4L8 307 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 EYA1Q99502 592 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 TAOK3Q9H2K8 898 aa19.11■□□□□ 0.65
SNRPF-203ENST00000551316 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
SNRPF-203ENST00000551316 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
SNRPF-203ENST00000551316 PAXIP1Q6ZW49 1069 aaPredicted RBP19.1■□□□□ 0.65
SNRPF-203ENST00000551316 CLEC11AQ9Y240 323 aa19.1■□□□□ 0.65
SNRPF-203ENST00000551316 GPR101Q96P66 508 aaPredicted RBP19.09■□□□□ 0.65
SNRPF-203ENST00000551316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNRPF-203ENST00000551316 COL4A5P29400 1685 aa19.08■□□□□ 0.65
SNRPF-203ENST00000551316 H0YIN7 160 aa19.08■□□□□ 0.64
SNRPF-203ENST00000551316 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
SNRPF-203ENST00000551316 COL15A1P39059 1388 aa19.07■□□□□ 0.64
SNRPF-203ENST00000551316 EPHX2P34913 555 aa19.07■□□□□ 0.64
SNRPF-203ENST00000551316 ZNF622Q969S3 477 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNRPF-203ENST00000551316 MKI67P46013 3256 aaKnown RBP19.06■□□□□ 0.64
SNRPF-203ENST00000551316 BEGAINQ9BUH8 593 aa19.06■□□□□ 0.64
SNRPF-203ENST00000551316 ERVV-2B6SEH9 535 aa19.05■□□□□ 0.64
SNRPF-203ENST00000551316 HACL1Q9UJ83 578 aa19.05■□□□□ 0.64
SNRPF-203ENST00000551316 TRAF5O00463 557 aa19.04■□□□□ 0.64
SNRPF-203ENST00000551316 ZPR1O75312 459 aa19.04■□□□□ 0.64
SNRPF-203ENST00000551316 CST9Q5W186 159 aa19.04■□□□□ 0.64
SNRPF-203ENST00000551316 DNAJC10Q8IXB1 793 aa19.04■□□□□ 0.64
SNRPF-203ENST00000551316 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
SNRPF-203ENST00000551316 SZT2Q5T011 3432 aa19.02■□□□□ 0.64
SNRPF-203ENST00000551316 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
SNRPF-203ENST00000551316 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 BICDL1Q6ZP65 573 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 TESK2Q96S53 571 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 ZIC5Q96T25 663 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
SNRPF-203ENST00000551316 ECE1P42892 770 aa19■□□□□ 0.63
SNRPF-203ENST00000551316 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
SNRPF-203ENST00000551316 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
SNRPF-203ENST00000551316 CARD11Q9BXL7 1154 aa19■□□□□ 0.63
SNRPF-203ENST00000551316 TLL2Q9Y6L7 1015 aa19■□□□□ 0.63
SNRPF-203ENST00000551316 PPM1GO15355 546 aaPredicted RBP18.99■□□□□ 0.63
SNRPF-203ENST00000551316 CABP4P57796 275 aa18.99■□□□□ 0.63
SNRPF-203ENST00000551316 PRR5LQ6MZQ0 368 aa18.99■□□□□ 0.63
SNRPF-203ENST00000551316 ZNF277Q9NRM2 450 aaPredicted RBP18.98■□□□□ 0.63
SNRPF-203ENST00000551316 CIAPIN1Q6FI81 312 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms