RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
LETMD1-228ENST00000550929 GYS1P13807 737 aa12.24□□□□□ -0.45
LETMD1-228ENST00000550929 C1QTNF8P60827 252 aa12.24□□□□□ -0.45
LETMD1-228ENST00000550929 ZNF526Q8TF50 670 aaPredicted RBP12.24□□□□□ -0.45
LETMD1-228ENST00000550929 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
LETMD1-228ENST00000550929 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
LETMD1-228ENST00000550929 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
LETMD1-228ENST00000550929 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
LETMD1-228ENST00000550929 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
LETMD1-228ENST00000550929 SLC52A2Q9HAB3 445 aa12.23□□□□□ -0.45
LETMD1-228ENST00000550929 FKBP8Q14318 412 aa12.21□□□□□ -0.45
LETMD1-228ENST00000550929 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
LETMD1-228ENST00000550929 PARP3Q9Y6F1 533 aa12.21□□□□□ -0.45
LETMD1-228ENST00000550929 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
LETMD1-228ENST00000550929 DPEP1P16444 411 aa12.2□□□□□ -0.46
LETMD1-228ENST00000550929 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
LETMD1-228ENST00000550929 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
LETMD1-228ENST00000550929 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-228ENST00000550929 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
LETMD1-228ENST00000550929 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
LETMD1-228ENST00000550929 TGFB2P61812 414 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 USPL1Q5W0Q7 1092 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
LETMD1-228ENST00000550929 FCHSD2O94868 740 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 DDR1Q08345 913 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
LETMD1-228ENST00000550929 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
LETMD1-228ENST00000550929 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
LETMD1-228ENST00000550929 ZPR1O75312 459 aa12.17□□□□□ -0.46
LETMD1-228ENST00000550929 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
LETMD1-228ENST00000550929 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
LETMD1-228ENST00000550929 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
LETMD1-228ENST00000550929 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
LETMD1-228ENST00000550929 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 TJP1Q07157 1748 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 CHRNA5P30532 468 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 TEFQ10587 303 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
LETMD1-228ENST00000550929 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-228ENST00000550929 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-228ENST00000550929 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 KCNA3P22001 575 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 TM4SF1P30408 202 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 PRKAR2BP31323 418 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 PHACTR3Q96KR7 559 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
LETMD1-228ENST00000550929 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
LETMD1-228ENST00000550929 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
LETMD1-228ENST00000550929 KCNQ3O43525 872 aa12.14□□□□□ -0.47
LETMD1-228ENST00000550929 ZNF330Q9Y3S2 320 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-228ENST00000550929 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-228ENST00000550929 KCPQ6ZWJ8 1503 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 ADCY9O60503 1353 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
LETMD1-228ENST00000550929 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
LETMD1-228ENST00000550929 NFIXQ14938 502 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 BICDL1Q6ZP65 573 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
LETMD1-228ENST00000550929 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 MRC1P22897 1456 aa12.13□□□□□ -0.47
LETMD1-228ENST00000550929 COL15A1P39059 1388 aa12.12□□□□□ -0.47
LETMD1-228ENST00000550929 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
LETMD1-228ENST00000550929 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
LETMD1-228ENST00000550929 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
LETMD1-228ENST00000550929 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
LETMD1-228ENST00000550929 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
LETMD1-228ENST00000550929 STARD3NLO95772 234 aa12.11□□□□□ -0.47
LETMD1-228ENST00000550929 A1BGP04217 495 aa12.11□□□□□ -0.47
LETMD1-228ENST00000550929 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
LETMD1-228ENST00000550929 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 SERPINB2P05120 415 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 MCM10Q7L590 875 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 CCDC24Q8N4L8 307 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
LETMD1-228ENST00000550929 KIF13BQ9NQT8 1826 aa12.09□□□□□ -0.47
LETMD1-228ENST00000550929 KIF3CO14782 793 aa12.09□□□□□ -0.47
LETMD1-228ENST00000550929 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-228ENST00000550929 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
LETMD1-228ENST00000550929 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
LETMD1-228ENST00000550929 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
LETMD1-228ENST00000550929 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
LETMD1-228ENST00000550929 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
LETMD1-228ENST00000550929 LHX8Q68G74 356 aa12.08□□□□□ -0.48
LETMD1-228ENST00000550929 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
LETMD1-228ENST00000550929 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
LETMD1-228ENST00000550929 A0A087WZG4 1122 aa12.07□□□□□ -0.48
LETMD1-228ENST00000550929 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
LETMD1-228ENST00000550929 C2CD5Q86YS7 1000 aa12.07□□□□□ -0.48
LETMD1-228ENST00000550929 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms