RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
DEPDC4-209ENST00000550587 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 NWD2Q9ULI1 1742 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 DIEXFQ68CQ4 756 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 GLI3P10071 1580 aa8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 RGPD8O14715 1765 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-209ENST00000550587 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 SLC24A1O60721 1099 aa8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 EVA1CP58658 441 aa8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 DLC1Q96QB1 1528 aa8.54□□□□□ -1.04
DEPDC4-209ENST00000550587 SPSB2Q99619 263 aa8.53□□□□□ -1.04
DEPDC4-209ENST00000550587 PLCH1Q4KWH8 1693 aa8.53□□□□□ -1.04
DEPDC4-209ENST00000550587 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
DEPDC4-209ENST00000550587 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-209ENST00000550587 ZNF697Q5TEC3 545 aa8.52□□□□□ -1.05
DEPDC4-209ENST00000550587 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.05
DEPDC4-209ENST00000550587 COL14A1Q05707 1796 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 FUT2Q10981 343 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 DDX10Q13206 875 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 MORN1Q5T089 497 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 GPIHBP1Q8IV16 184 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 NUDT16Q96DE0 195 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 TESK2Q96S53 571 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
DEPDC4-209ENST00000550587 CCDC7Q96M83 1385 aa8.5□□□□□ -1.05
DEPDC4-209ENST00000550587 TULP4Q9NRJ4 1543 aa8.5□□□□□ -1.05
DEPDC4-209ENST00000550587 TNFRSF10AO00220 468 aa8.5□□□□□ -1.05
DEPDC4-209ENST00000550587 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
DEPDC4-209ENST00000550587 ADGRB2O60241 1585 aa8.5□□□□□ -1.05
DEPDC4-209ENST00000550587 GDF9O60383 454 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 YY1P25490 414 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 LRP5O75197 1615 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 KIF7Q2M1P5 1343 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
DEPDC4-209ENST00000550587 APBA3O96018 575 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 GCGRP47871 477 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 TMF1P82094 1093 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR20EP86478 221 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR20CP86479 221 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR20DP86480 221 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR20BP86481 221 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR20AP86496 221 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 CHRNA2Q15822 529 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PKDCCQ504Y2 493 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 RGPD1P0DJD0 1748 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 ITSN1Q15811 1721 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 PRR36Q9H6K5 1346 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
DEPDC4-209ENST00000550587 ATP7BP35670 1465 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 TRIM37O94972 964 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 R3HDM1Q15032 1099 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 CDCA8Q53HL2 280 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 THRAP3Q9Y2W1 955 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 ACEP12821 1306 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 CENPJQ9HC77 1338 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
DEPDC4-209ENST00000550587 ALS2Q96Q42 1657 aa8.46□□□□□ -1.05
DEPDC4-209ENST00000550587 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
DEPDC4-209ENST00000550587 EP400Q96L91 3159 aa8.46□□□□□ -1.05
DEPDC4-209ENST00000550587 DGAT1O75907 488 aa8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 EZH2Q15910 746 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 TCP11L2Q8N4U5 519 aa8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 NRAPQ86VF7 1730 aa8.46□□□□□ -1.06
DEPDC4-209ENST00000550587 PLEKHG3A1L390 1219 aa8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 FAM187AA6NFU0 413 aa8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 FMNL1O95466 1100 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 FOXC1Q12948 553 aa8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 PPP1R1BQ9UD71 204 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms