RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 BCL2L12Q9HB09 334 aa15.68■□□□□ 0.1
LETMD1-221ENST00000550100 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
LETMD1-221ENST00000550100 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
LETMD1-221ENST00000550100 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
LETMD1-221ENST00000550100 DDR1Q08345 913 aa15.67■□□□□ 0.1
LETMD1-221ENST00000550100 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
LETMD1-221ENST00000550100 NLGN1Q8N2Q7 840 aa15.67■□□□□ 0.1
LETMD1-221ENST00000550100 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
LETMD1-221ENST00000550100 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
LETMD1-221ENST00000550100 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
LETMD1-221ENST00000550100 ADAMTS8Q9UP79 889 aa15.66■□□□□ 0.1
LETMD1-221ENST00000550100 EIF5P55010 431 aaKnown RBP15.65■□□□□ 0.1
LETMD1-221ENST00000550100 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-221ENST00000550100 GPR162Q16538 588 aa15.65■□□□□ 0.1
LETMD1-221ENST00000550100 WWC3Q9ULE0 1092 aa15.65■□□□□ 0.1
LETMD1-221ENST00000550100 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
LETMD1-221ENST00000550100 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-221ENST00000550100 TM4SF1P30408 202 aa15.65■□□□□ 0.1
LETMD1-221ENST00000550100 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
LETMD1-221ENST00000550100 COL15A1P39059 1388 aa15.64■□□□□ 0.09
LETMD1-221ENST00000550100 STARD3NLO95772 234 aa15.64■□□□□ 0.09
LETMD1-221ENST00000550100 TMPOP42166 694 aaKnown RBP15.64■□□□□ 0.09
LETMD1-221ENST00000550100 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
LETMD1-221ENST00000550100 YY1P25490 414 aa15.63■□□□□ 0.09
LETMD1-221ENST00000550100 RIPK4P57078 832 aa15.63■□□□□ 0.09
LETMD1-221ENST00000550100 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
LETMD1-221ENST00000550100 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
LETMD1-221ENST00000550100 NBPF26B4DH59 902 aa15.62■□□□□ 0.09
LETMD1-221ENST00000550100 POLRMTO00411 1230 aaKnown RBP15.62■□□□□ 0.09
LETMD1-221ENST00000550100 NBPF10Q6P3W6 841 aaKnown RBP15.62■□□□□ 0.09
LETMD1-221ENST00000550100 NBPF15Q8N660 670 aa15.62■□□□□ 0.09
LETMD1-221ENST00000550100 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 ZPR1O75312 459 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 NFIXQ14938 502 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 TEX13AQ9BXU3 409 aaPredicted RBP15.61■□□□□ 0.09
LETMD1-221ENST00000550100 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
LETMD1-221ENST00000550100 SNRPA1P09661 255 aaKnown RBP15.6■□□□□ 0.09
LETMD1-221ENST00000550100 KCNA3P22001 575 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
LETMD1-221ENST00000550100 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
LETMD1-221ENST00000550100 PARP3Q9Y6F1 533 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 C10orf71Q711Q0 1435 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
LETMD1-221ENST00000550100 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
LETMD1-221ENST00000550100 NEFMP07197 916 aa15.59■□□□□ 0.09
LETMD1-221ENST00000550100 ZNF330Q9Y3S2 320 aaPredicted RBP15.59■□□□□ 0.09
LETMD1-221ENST00000550100 DPEP1P16444 411 aa15.59■□□□□ 0.09
LETMD1-221ENST00000550100 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
LETMD1-221ENST00000550100 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
LETMD1-221ENST00000550100 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.08
LETMD1-221ENST00000550100 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
LETMD1-221ENST00000550100 WDR43Q15061 677 aaKnown RBP eCLIP15.58■□□□□ 0.08
LETMD1-221ENST00000550100 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
LETMD1-221ENST00000550100 CHD4Q14839 1912 aa15.57■□□□□ 0.08
LETMD1-221ENST00000550100 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
LETMD1-221ENST00000550100 BICDL1Q6ZP65 573 aa15.57■□□□□ 0.08
LETMD1-221ENST00000550100 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
LETMD1-221ENST00000550100 A0A087WZG4 1122 aa15.55■□□□□ 0.08
LETMD1-221ENST00000550100 CHRNA5P30532 468 aa15.55■□□□□ 0.08
LETMD1-221ENST00000550100 TGFB2P61812 414 aa15.55■□□□□ 0.08
LETMD1-221ENST00000550100 KRT24Q2M2I5 525 aa15.55■□□□□ 0.08
LETMD1-221ENST00000550100 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
LETMD1-221ENST00000550100 APAF1O14727 1248 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 SERPINB2P05120 415 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
LETMD1-221ENST00000550100 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
LETMD1-221ENST00000550100 CHL1O00533 1208 aa15.52■□□□□ 0.08
LETMD1-221ENST00000550100 GRIN3BO60391 1043 aa15.52■□□□□ 0.08
LETMD1-221ENST00000550100 ZNF784Q8NCA9 323 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-221ENST00000550100 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.08
LETMD1-221ENST00000550100 SCN7AQ01118 1682 aa15.52■□□□□ 0.08
LETMD1-221ENST00000550100 HLFQ16534 295 aa15.52■□□□□ 0.07
LETMD1-221ENST00000550100 NGEFQ8N5V2 710 aa15.52■□□□□ 0.07
LETMD1-221ENST00000550100 PDIA6Q15084 440 aa15.51■□□□□ 0.07
LETMD1-221ENST00000550100 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
LETMD1-221ENST00000550100 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
LETMD1-221ENST00000550100 BCS1LQ9Y276 419 aa15.51■□□□□ 0.07
LETMD1-221ENST00000550100 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
LETMD1-221ENST00000550100 BCORQ6W2J9 1755 aa15.5■□□□□ 0.07
LETMD1-221ENST00000550100 ANXA1P04083 346 aa15.5■□□□□ 0.07
LETMD1-221ENST00000550100 PROSER3Q2NL68 480 aa15.5■□□□□ 0.07
LETMD1-221ENST00000550100 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
LETMD1-221ENST00000550100 MYL6BP14649 208 aa15.49■□□□□ 0.07
LETMD1-221ENST00000550100 LMOD3Q0VAK6 560 aa15.49■□□□□ 0.07
LETMD1-221ENST00000550100 PRR5LQ6MZQ0 368 aa15.49■□□□□ 0.07
LETMD1-221ENST00000550100 BABAM1Q9NWV8 329 aa15.49■□□□□ 0.07
LETMD1-221ENST00000550100 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
LETMD1-221ENST00000550100 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
LETMD1-221ENST00000550100 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
LETMD1-221ENST00000550100 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
LETMD1-221ENST00000550100 SETDB2Q96T68 719 aa15.47■□□□□ 0.07
LETMD1-221ENST00000550100 PIM2Q9P1W9 311 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms