RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 RNMTO43148 476 aaKnown RBP8.34□□□□□ -1.07
CASC18-202ENST00000548557 PDE4AP27815 886 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 DCTN1Q14203 1278 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 DDX54Q8TDD1 881 aaKnown RBP8.34□□□□□ -1.07
CASC18-202ENST00000548557 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 DSG3P32926 999 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 RBM6P78332 1123 aaKnown RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 C20orf194Q5TEA3 1177 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 SECISBP2LQ93073 1101 aaKnown RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 KDM4AO75164 1064 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 GLI3P10071 1580 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 TEFQ10587 303 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 THUMPD2Q9BTF0 503 aaKnown RBP8.33□□□□□ -1.08
CASC18-202ENST00000548557 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
CASC18-202ENST00000548557 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
CASC18-202ENST00000548557 CHL1O00533 1208 aa8.32□□□□□ -1.08
CASC18-202ENST00000548557 ILDR1Q86SU0 546 aaPredicted RBP8.32□□□□□ -1.08
CASC18-202ENST00000548557 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
CASC18-202ENST00000548557 SLC52A2Q9HAB3 445 aa8.32□□□□□ -1.08
CASC18-202ENST00000548557 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
CASC18-202ENST00000548557 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
CASC18-202ENST00000548557 KDM6AO15550 1401 aaPredicted RBP8.31□□□□□ -1.08
CASC18-202ENST00000548557 A0A0G2JS52 829 aa8.31□□□□□ -1.08
CASC18-202ENST00000548557 SETQ01105 290 aaPredicted RBP8.31□□□□□ -1.08
CASC18-202ENST00000548557 THSD7AQ9UPZ6 1657 aa8.31□□□□□ -1.08
CASC18-202ENST00000548557 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
CASC18-202ENST00000548557 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 MRC1P22897 1456 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 RXRBP28702 533 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 MFAP1P55081 439 aaKnown RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 MARCH10Q8NA82 808 aaPredicted RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 MBIPQ9NS73 344 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 LAS1LQ9Y4W2 734 aaKnown RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 CABP4P57796 275 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 TMCO4Q5TGY1 634 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 IPO4Q8TEX9 1081 aaKnown RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 RGS17Q9UGC6 210 aaPredicted RBP8.3□□□□□ -1.08
CASC18-202ENST00000548557 TSPYL4Q9UJ04 414 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 BCL9O00512 1426 aa8.3□□□□□ -1.08
CASC18-202ENST00000548557 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
CASC18-202ENST00000548557 ANAPC15P60006 121 aa8.29□□□□□ -1.08
CASC18-202ENST00000548557 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
CASC18-202ENST00000548557 SCN11AQ9UI33 1791 aa8.29□□□□□ -1.08
CASC18-202ENST00000548557 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
CASC18-202ENST00000548557 TSR2Q969E8 191 aaKnown RBP8.29□□□□□ -1.08
CASC18-202ENST00000548557 SOS1Q07889 1333 aaPredicted RBP8.28□□□□□ -1.08
CASC18-202ENST00000548557 FAM43BQ6ZT52 329 aaPredicted RBP8.28□□□□□ -1.08
CASC18-202ENST00000548557 CENPQQ7L2Z9 268 aaPredicted RBP8.28□□□□□ -1.08
CASC18-202ENST00000548557 SKAP1Q86WV1 359 aa8.28□□□□□ -1.08
CASC18-202ENST00000548557 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
CASC18-202ENST00000548557 ABCB7O75027 752 aa8.27□□□□□ -1.09
CASC18-202ENST00000548557 EXOSC9Q06265 439 aaKnown RBP8.27□□□□□ -1.09
CASC18-202ENST00000548557 ZNF790Q6PG37 636 aa8.27□□□□□ -1.09
CASC18-202ENST00000548557 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
CASC18-202ENST00000548557 KRT27Q7Z3Y8 459 aa8.27□□□□□ -1.09
CASC18-202ENST00000548557 MIS18AQ9NYP9 233 aa8.27□□□□□ -1.09
CASC18-202ENST00000548557 HOXB7P09629 217 aa8.26□□□□□ -1.09
CASC18-202ENST00000548557 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
CASC18-202ENST00000548557 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
CASC18-202ENST00000548557 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
CASC18-202ENST00000548557 TTC5Q8N0Z6 440 aa8.26□□□□□ -1.09
CASC18-202ENST00000548557 TWISTNBQ3B726 338 aaPredicted RBP8.26□□□□□ -1.09
CASC18-202ENST00000548557 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
CASC18-202ENST00000548557 PIGBQ92521 554 aa8.26□□□□□ -1.09
CASC18-202ENST00000548557 KCNG1Q9UIX4 513 aa8.26□□□□□ -1.09
CASC18-202ENST00000548557 SIPA1L3O60292 1781 aaPredicted RBP8.26□□□□□ -1.09
CASC18-202ENST00000548557 VIRMAQ69YN4 1812 aaKnown RBP8.25□□□□□ -1.09
CASC18-202ENST00000548557 BCAR3O75815 825 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 MCCP23508 829 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
CASC18-202ENST00000548557 HEG1Q9ULI3 1381 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 VAMP4O75379 141 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 SYTL4Q96C24 671 aaPredicted RBP8.25□□□□□ -1.09
CASC18-202ENST00000548557 FMNL2Q96PY5 1086 aa8.25□□□□□ -1.09
CASC18-202ENST00000548557 TOGARAM1Q9Y4F4 1720 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 SLC39A6Q13433 755 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 ALDH1L2Q3SY69 923 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 KDM3BQ7LBC6 1761 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 TSPYL6Q8N831 410 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 RGS12O14924 1447 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 KCNQ3O43525 872 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
CASC18-202ENST00000548557 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
CASC18-202ENST00000548557 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
CASC18-202ENST00000548557 ELL2O00472 640 aaPredicted RBP8.23□□□□□ -1.09
CASC18-202ENST00000548557 MAFGO15525 162 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 SNRPA1P09661 255 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms