RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ADGRL3Q9HAR2 1447 aa18.6■□□□□ 0.57
CNN3-207ENST00000545882 ANKLE2Q86XL3 938 aa18.6■□□□□ 0.57
CNN3-207ENST00000545882 USHBP1Q8N6Y0 703 aa18.6■□□□□ 0.57
CNN3-207ENST00000545882 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
CNN3-207ENST00000545882 PHRF1Q9P1Y6 1649 aaKnown RBP18.59■□□□□ 0.57
CNN3-207ENST00000545882 HDGFL1Q5TGJ6 251 aa18.59■□□□□ 0.57
CNN3-207ENST00000545882 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
CNN3-207ENST00000545882 INTS4Q96HW7 963 aaKnown RBP18.59■□□□□ 0.57
CNN3-207ENST00000545882 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
CNN3-207ENST00000545882 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
CNN3-207ENST00000545882 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
CNN3-207ENST00000545882 ZSCAN30Q86W11 494 aa18.58■□□□□ 0.56
CNN3-207ENST00000545882 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
CNN3-207ENST00000545882 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
CNN3-207ENST00000545882 PDLIM2Q96JY6 352 aa18.58■□□□□ 0.56
CNN3-207ENST00000545882 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
CNN3-207ENST00000545882 LMO7Q8WWI1 1683 aa18.57■□□□□ 0.56
CNN3-207ENST00000545882 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
CNN3-207ENST00000545882 HSPA4P34932 840 aa18.57■□□□□ 0.56
CNN3-207ENST00000545882 LRSAM1Q6UWE0 723 aa18.57■□□□□ 0.56
CNN3-207ENST00000545882 ANP32BQ92688 251 aaKnown RBP18.57■□□□□ 0.56
CNN3-207ENST00000545882 UPF3BQ9BZI7 483 aaKnown RBP18.57■□□□□ 0.56
CNN3-207ENST00000545882 EPB41L2O43491 1005 aaKnown RBP18.56■□□□□ 0.56
CNN3-207ENST00000545882 RHPN1Q8TCX5 695 aa18.56■□□□□ 0.56
CNN3-207ENST00000545882 SYCE3A1L190 88 aa18.55■□□□□ 0.56
CNN3-207ENST00000545882 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
CNN3-207ENST00000545882 MAP4K4O95819 1239 aaPredicted RBP18.55■□□□□ 0.56
CNN3-207ENST00000545882 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
CNN3-207ENST00000545882 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
CNN3-207ENST00000545882 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
CNN3-207ENST00000545882 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
CNN3-207ENST00000545882 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
CNN3-207ENST00000545882 KCNQ3O43525 872 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
CNN3-207ENST00000545882 SGSM2O43147 1006 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 MBD3O95983 291 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 HS1BP3Q53T59 392 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 NBPF6Q5VWK0 638 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 NBPF4Q96M43 638 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.53■□□□□ 0.56
CNN3-207ENST00000545882 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
CNN3-207ENST00000545882 SRGAP3O43295 1099 aa18.52■□□□□ 0.56
CNN3-207ENST00000545882 IP6K1Q92551 441 aa18.52■□□□□ 0.56
CNN3-207ENST00000545882 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.56
CNN3-207ENST00000545882 RAD50Q92878 1312 aa18.51■□□□□ 0.55
CNN3-207ENST00000545882 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
CNN3-207ENST00000545882 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
CNN3-207ENST00000545882 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
CNN3-207ENST00000545882 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
CNN3-207ENST00000545882 TTC14Q96N46 770 aa18.51■□□□□ 0.55
CNN3-207ENST00000545882 ADCY9O60503 1353 aa18.5■□□□□ 0.55
CNN3-207ENST00000545882 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
CNN3-207ENST00000545882 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
CNN3-207ENST00000545882 HOXB7P09629 217 aa18.5■□□□□ 0.55
CNN3-207ENST00000545882 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
CNN3-207ENST00000545882 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
CNN3-207ENST00000545882 GADD45BO75293 160 aaPredicted RBP18.49■□□□□ 0.55
CNN3-207ENST00000545882 ANXA1P04083 346 aa18.49■□□□□ 0.55
CNN3-207ENST00000545882 RASEFQ8IZ41 740 aa18.49■□□□□ 0.55
CNN3-207ENST00000545882 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
CNN3-207ENST00000545882 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
CNN3-207ENST00000545882 SLIT3O75094 1523 aa18.49■□□□□ 0.55
CNN3-207ENST00000545882 OFD1O75665 1012 aa18.49■□□□□ 0.55
CNN3-207ENST00000545882 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
CNN3-207ENST00000545882 MSNP26038 577 aaKnown RBP18.47■□□□□ 0.55
CNN3-207ENST00000545882 GDPD2Q9HCC8 539 aa18.47■□□□□ 0.55
CNN3-207ENST00000545882 NCAPD2Q15021 1401 aa18.47■□□□□ 0.55
CNN3-207ENST00000545882 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
CNN3-207ENST00000545882 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
CNN3-207ENST00000545882 USP48Q86UV5 1035 aa18.47■□□□□ 0.55
CNN3-207ENST00000545882 CNTROBQ8N137 903 aa18.47■□□□□ 0.55
CNN3-207ENST00000545882 UBE2Q2Q8WVN8 375 aa18.47■□□□□ 0.55
CNN3-207ENST00000545882 TRPM3Q9HCF6 1732 aaPredicted RBP18.47■□□□□ 0.55
CNN3-207ENST00000545882 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
CNN3-207ENST00000545882 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
CNN3-207ENST00000545882 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
CNN3-207ENST00000545882 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
CNN3-207ENST00000545882 AK2P54819 239 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 MTX1Q13505 466 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 RUFY3Q7L099 469 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 PXDNQ92626 1479 aa18.45■□□□□ 0.54
CNN3-207ENST00000545882 ZNF500O60304 480 aaPredicted RBP18.45■□□□□ 0.54
CNN3-207ENST00000545882 CWC27Q6UX04 472 aaKnown RBP18.45■□□□□ 0.54
CNN3-207ENST00000545882 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
CNN3-207ENST00000545882 TTC41PQ6P2S7 1318 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 PSME1Q06323 249 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 TMEM87AQ8NBN3 555 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 RNF214Q8ND24 703 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 LARP6Q9BRS8 491 aaKnown RBP18.44■□□□□ 0.54
CNN3-207ENST00000545882 TSPY26PQ9H489 355 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
CNN3-207ENST00000545882 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
CNN3-207ENST00000545882 TPM2P07951 284 aa18.43■□□□□ 0.54
CNN3-207ENST00000545882 HSP90AB4PQ58FF6 505 aa18.43■□□□□ 0.54
CNN3-207ENST00000545882 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
CNN3-207ENST00000545882 ZKSCAN5Q9Y2L8 839 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms