RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CCDC144CPQ8IYA2 1237 aa17.88■□□□□ 0.45
CHD4-210ENST00000544040 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
CHD4-210ENST00000544040 SNW1Q13573 536 aaKnown RBP17.88■□□□□ 0.45
CHD4-210ENST00000544040 TRIM21P19474 475 aaKnown RBP17.88■□□□□ 0.45
CHD4-210ENST00000544040 MTIF2P46199 727 aaKnown RBP17.87■□□□□ 0.45
CHD4-210ENST00000544040 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
CHD4-210ENST00000544040 TNIP1Q15025 636 aa17.87■□□□□ 0.45
CHD4-210ENST00000544040 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
CHD4-210ENST00000544040 PROSER2Q86WR7 435 aaPredicted RBP17.87■□□□□ 0.45
CHD4-210ENST00000544040 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
CHD4-210ENST00000544040 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
CHD4-210ENST00000544040 ALS2CR12Q96Q35 445 aa17.87■□□□□ 0.45
CHD4-210ENST00000544040 CCDC8Q9H0W5 538 aaPredicted RBP17.87■□□□□ 0.45
CHD4-210ENST00000544040 JADE2Q9NQC1 790 aa17.87■□□□□ 0.45
CHD4-210ENST00000544040 SCAPERQ9BY12 1400 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 RAB11FIP3O75154 756 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 COMMD10Q9Y6G5 202 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 NOP2P46087 812 aaKnown RBP17.86■□□□□ 0.45
CHD4-210ENST00000544040 DRC1Q96MC2 740 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
CHD4-210ENST00000544040 KIF1BPQ96EK5 621 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 ZNF830Q96NB3 372 aaPredicted RBP17.86■□□□□ 0.45
CHD4-210ENST00000544040 SLC12A7Q9Y666 1083 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 MCM10Q7L590 875 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 NAPBQ9H115 298 aa17.86■□□□□ 0.45
CHD4-210ENST00000544040 PPM1EQ8WY54 764 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 GJB2P29033 226 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 RAB11FIP4Q86YS3 637 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 HOMER2Q9NSB8 354 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
CHD4-210ENST00000544040 IFIT1P09914 478 aaKnown RBP17.85■□□□□ 0.45
CHD4-210ENST00000544040 NLRP5P59047 1200 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 GIGYF2Q6Y7W6 1299 aaKnown RBP17.85■□□□□ 0.45
CHD4-210ENST00000544040 CRACR2BQ8N4Y2 399 aaPredicted RBP17.85■□□□□ 0.45
CHD4-210ENST00000544040 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
CHD4-210ENST00000544040 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 MYO1BO43795 1136 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 MNAT1P51948 309 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 TCERG1LQ5VWI1 586 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 CCDC12Q8WUD4 166 aaPredicted RBP17.84■□□□□ 0.45
CHD4-210ENST00000544040 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 MYD88Q99836 296 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 NAA15Q9BXJ9 866 aaKnown RBP17.84■□□□□ 0.45
CHD4-210ENST00000544040 ANKRD30BQ9BXX2 1392 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 CUX1P39880 1505 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 GLRX3O76003 335 aaKnown RBP17.84■□□□□ 0.45
CHD4-210ENST00000544040 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 MMRN2Q9H8L6 949 aa17.84■□□□□ 0.45
CHD4-210ENST00000544040 FGFR1OPO95684 399 aaKnown RBP17.83■□□□□ 0.45
CHD4-210ENST00000544040 STX1AQ16623 288 aa17.83■□□□□ 0.45
CHD4-210ENST00000544040 TAOK3Q9H2K8 898 aa17.83■□□□□ 0.45
CHD4-210ENST00000544040 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.45
CHD4-210ENST00000544040 POTEB2H3BUK9 544 aa17.83■□□□□ 0.44
CHD4-210ENST00000544040 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
CHD4-210ENST00000544040 DUSP27Q5VZP5 1158 aa17.83■□□□□ 0.44
CHD4-210ENST00000544040 CCDC40Q4G0X9 1142 aa17.83■□□□□ 0.44
CHD4-210ENST00000544040 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
CHD4-210ENST00000544040 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
CHD4-210ENST00000544040 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
CHD4-210ENST00000544040 CTAGE5O15320 804 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 GNG11P61952 73 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 CCDC150Q8NCX0 1101 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 ZNF213O14771 459 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
CHD4-210ENST00000544040 GSDMDP57764 484 aa17.82■□□□□ 0.44
CHD4-210ENST00000544040 PAIP2Q9BPZ3 127 aaKnown RBP17.82■□□□□ 0.44
CHD4-210ENST00000544040 LIMCH1Q9UPQ0 1083 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 PHAXQ9H814 394 aaKnown RBP17.81■□□□□ 0.44
CHD4-210ENST00000544040 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 PRC1O43663 620 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 HSF2BPO75031 334 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 CEP112Q8N8E3 955 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 F6X3S4 739 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 PUF60Q9UHX1 559 aaKnown RBP17.81■□□□□ 0.44
CHD4-210ENST00000544040 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 DNAAF4Q8WXU2 420 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 IFIT3O14879 490 aaKnown RBP17.81■□□□□ 0.44
CHD4-210ENST00000544040 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
CHD4-210ENST00000544040 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 HSP90AA4PQ58FG1 418 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
CHD4-210ENST00000544040 BMS1Q14692 1282 aaKnown RBP17.8■□□□□ 0.44
CHD4-210ENST00000544040 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 IDEP14735 1019 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 TERF1P54274 439 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 RSPH14Q9UHP6 348 aa17.8■□□□□ 0.44
CHD4-210ENST00000544040 NEMFO60524 1076 aa17.79■□□□□ 0.44
CHD4-210ENST00000544040 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
CHD4-210ENST00000544040 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms