RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
INO80E-203ENST00000540562 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
INO80E-203ENST00000540562 MYL6BP14649 208 aa17.12■□□□□ 0.33
INO80E-203ENST00000540562 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
INO80E-203ENST00000540562 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
INO80E-203ENST00000540562 C3P01024 1663 aa17.12■□□□□ 0.33
INO80E-203ENST00000540562 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
INO80E-203ENST00000540562 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
INO80E-203ENST00000540562 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
INO80E-203ENST00000540562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
INO80E-203ENST00000540562 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
INO80E-203ENST00000540562 KCNJ4P48050 445 aa17.11■□□□□ 0.33
INO80E-203ENST00000540562 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
INO80E-203ENST00000540562 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
INO80E-203ENST00000540562 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
INO80E-203ENST00000540562 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
INO80E-203ENST00000540562 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
INO80E-203ENST00000540562 LARGE1O95461 756 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
INO80E-203ENST00000540562 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
INO80E-203ENST00000540562 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
INO80E-203ENST00000540562 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 MAP3K2Q9Y2U5 619 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
INO80E-203ENST00000540562 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
INO80E-203ENST00000540562 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
INO80E-203ENST00000540562 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
INO80E-203ENST00000540562 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
INO80E-203ENST00000540562 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
INO80E-203ENST00000540562 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
INO80E-203ENST00000540562 CHGBP05060 677 aa17.09■□□□□ 0.33
INO80E-203ENST00000540562 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
INO80E-203ENST00000540562 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.33
INO80E-203ENST00000540562 FOSBP53539 338 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 AK2P54819 239 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 USP48Q86UV5 1035 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 USP31Q70CQ4 1352 aa17.08■□□□□ 0.33
INO80E-203ENST00000540562 PTH1RQ03431 593 aa17.08■□□□□ 0.32
INO80E-203ENST00000540562 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
INO80E-203ENST00000540562 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
INO80E-203ENST00000540562 TECPR2O15040 1411 aa17.07■□□□□ 0.32
INO80E-203ENST00000540562 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
INO80E-203ENST00000540562 STK3Q13188 491 aa17.07■□□□□ 0.32
INO80E-203ENST00000540562 AACSQ86V21 672 aa17.07■□□□□ 0.32
INO80E-203ENST00000540562 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
INO80E-203ENST00000540562 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
INO80E-203ENST00000540562 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
INO80E-203ENST00000540562 ZSCAN30Q86W11 494 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
INO80E-203ENST00000540562 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 PTMSP20962 102 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
INO80E-203ENST00000540562 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
INO80E-203ENST00000540562 BRD1O95696 1058 aa17.05■□□□□ 0.32
INO80E-203ENST00000540562 IFIT2P09913 472 aaKnown RBP17.05■□□□□ 0.32
INO80E-203ENST00000540562 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
INO80E-203ENST00000540562 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
INO80E-203ENST00000540562 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
INO80E-203ENST00000540562 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
INO80E-203ENST00000540562 AGLP35573 1532 aa17.05■□□□□ 0.32
INO80E-203ENST00000540562 ZNF445P59923 1031 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 KDRP35968 1356 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
INO80E-203ENST00000540562 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 TAF6LQ9Y6J9 622 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
INO80E-203ENST00000540562 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 CLASRPQ8N2M8 674 aaKnown RBP17.03■□□□□ 0.32
INO80E-203ENST00000540562 ISY1Q9ULR0 285 aaKnown RBP17.03■□□□□ 0.32
INO80E-203ENST00000540562 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
INO80E-203ENST00000540562 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
INO80E-203ENST00000540562 SGSM2O43147 1006 aa17.02■□□□□ 0.32
INO80E-203ENST00000540562 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.32
INO80E-203ENST00000540562 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
INO80E-203ENST00000540562 HSPA4P34932 840 aa17.02■□□□□ 0.31
INO80E-203ENST00000540562 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.31
INO80E-203ENST00000540562 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.31
INO80E-203ENST00000540562 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
INO80E-203ENST00000540562 DNM1Q05193 864 aaKnown RBP17.01■□□□□ 0.31
INO80E-203ENST00000540562 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
INO80E-203ENST00000540562 SSH2Q76I76 1423 aa17.01■□□□□ 0.31
INO80E-203ENST00000540562 SYT1P21579 422 aa17.01■□□□□ 0.31
INO80E-203ENST00000540562 CAMK4Q16566 473 aa17■□□□□ 0.31
INO80E-203ENST00000540562 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms