RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
LRP6-204ENST00000540415 SOS1Q07889 1333 aaPredicted RBP11.1□□□□□ -0.63
LRP6-204ENST00000540415 TJP1Q07157 1748 aa11.1□□□□□ -0.63
LRP6-204ENST00000540415 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
LRP6-204ENST00000540415 MTHFSP49914 203 aa11.1□□□□□ -0.63
LRP6-204ENST00000540415 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
LRP6-204ENST00000540415 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
LRP6-204ENST00000540415 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
LRP6-204ENST00000540415 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 ZPR1O75312 459 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 SERPINB2P05120 415 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
LRP6-204ENST00000540415 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
LRP6-204ENST00000540415 ZBTB1Q9Y2K1 713 aa11.08□□□□□ -0.64
LRP6-204ENST00000540415 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 C21orf2O43822 256 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
LRP6-204ENST00000540415 CYP19A1P11511 503 aaPredicted RBP11.07□□□□□ -0.64
LRP6-204ENST00000540415 VEGFBP49765 207 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 BICDL1Q6ZP65 573 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
LRP6-204ENST00000540415 COL15A1P39059 1388 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 LBX1P52954 281 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 C1orf141Q5JVX7 400 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 LGR6Q9HBX8 967 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 PASKQ96RG2 1323 aa11.06□□□□□ -0.64
LRP6-204ENST00000540415 H0YIN7 160 aa11.05□□□□□ -0.64
LRP6-204ENST00000540415 CTCFP49711 727 aaPredicted RBP11.05□□□□□ -0.64
LRP6-204ENST00000540415 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
LRP6-204ENST00000540415 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
LRP6-204ENST00000540415 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRP6-204ENST00000540415 NRXN2Q9P2S2 1712 aa11.05□□□□□ -0.64
LRP6-204ENST00000540415 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
LRP6-204ENST00000540415 POLR3GLQ9BT43 218 aa11.04□□□□□ -0.64
LRP6-204ENST00000540415 WBP1LQ9NX94 342 aa11.04□□□□□ -0.64
LRP6-204ENST00000540415 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
LRP6-204ENST00000540415 HSPA8P11142 646 aaKnown RBP11.03□□□□□ -0.64
LRP6-204ENST00000540415 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
LRP6-204ENST00000540415 TBC1D9BQ66K14 1250 aa11.03□□□□□ -0.64
LRP6-204ENST00000540415 SULT6B1Q6IMI4 303 aa11.03□□□□□ -0.64
LRP6-204ENST00000540415 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
LRP6-204ENST00000540415 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
LRP6-204ENST00000540415 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
LRP6-204ENST00000540415 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
LRP6-204ENST00000540415 PRR5LQ6MZQ0 368 aa11.02□□□□□ -0.65
LRP6-204ENST00000540415 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
LRP6-204ENST00000540415 TMEM88BA6NKF7 163 aa11.01□□□□□ -0.65
LRP6-204ENST00000540415 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
LRP6-204ENST00000540415 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
LRP6-204ENST00000540415 RNMTO43148 476 aaKnown RBP11□□□□□ -0.65
LRP6-204ENST00000540415 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
LRP6-204ENST00000540415 BRIP1Q9BX63 1249 aa11□□□□□ -0.65
LRP6-204ENST00000540415 ZNF541Q9H0D2 1346 aa11□□□□□ -0.65
LRP6-204ENST00000540415 COL11A2P13942 1736 aaPredicted RBP11□□□□□ -0.65
LRP6-204ENST00000540415 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
LRP6-204ENST00000540415 AKAP4Q5JQC9 854 aa10.99□□□□□ -0.65
LRP6-204ENST00000540415 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
LRP6-204ENST00000540415 OLFM4Q6UX06 510 aa10.99□□□□□ -0.65
LRP6-204ENST00000540415 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
LRP6-204ENST00000540415 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
LRP6-204ENST00000540415 LTBP3Q9NS15 1303 aa10.99□□□□□ -0.65
LRP6-204ENST00000540415 CCDC88AQ3V6T2 1871 aa10.99□□□□□ -0.65
LRP6-204ENST00000540415 ANKRD31Q8N7Z5 1873 aa10.98□□□□□ -0.65
LRP6-204ENST00000540415 IL13P35225 146 aa10.98□□□□□ -0.65
LRP6-204ENST00000540415 PDE6BP35913 854 aa10.98□□□□□ -0.65
LRP6-204ENST00000540415 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRP6-204ENST00000540415 MAP1SQ66K74 1059 aaPredicted RBP10.98□□□□□ -0.65
LRP6-204ENST00000540415 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
LRP6-204ENST00000540415 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
LRP6-204ENST00000540415 MRC1P22897 1456 aa10.98□□□□□ -0.65
LRP6-204ENST00000540415 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
LRP6-204ENST00000540415 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
LRP6-204ENST00000540415 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
LRP6-204ENST00000540415 DEFB115Q30KQ5 88 aa10.97□□□□□ -0.65
LRP6-204ENST00000540415 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
LRP6-204ENST00000540415 FER1L6Q2WGJ9 1857 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 SCN11AQ9UI33 1791 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 WDR33Q9C0J8 1336 aaKnown RBP10.96□□□□□ -0.65
LRP6-204ENST00000540415 HMOX1P09601 288 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 SRGNP10124 158 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 C7orf43Q8WVR3 580 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 PANK3Q9H999 370 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
LRP6-204ENST00000540415 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 EPHX2P34913 555 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 MLLT1Q03111 559 aaPredicted RBP10.95□□□□□ -0.66
LRP6-204ENST00000540415 MTHFSDQ2M296 383 aaKnown RBP10.95□□□□□ -0.66
LRP6-204ENST00000540415 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 CNBD1Q8NA66 436 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms