RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

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Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
MRE11-209ENST00000540013 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
MRE11-209ENST00000540013 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
MRE11-209ENST00000540013 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
MRE11-209ENST00000540013 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
MRE11-209ENST00000540013 TAS1R3Q7RTX0 852 aa9.32□□□□□ -0.92
MRE11-209ENST00000540013 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
MRE11-209ENST00000540013 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
MRE11-209ENST00000540013 SCHIP1Q9P0W5 487 aaPredicted RBP9.32□□□□□ -0.92
MRE11-209ENST00000540013 FIGNL2A6NMB9 653 aa9.31□□□□□ -0.92
MRE11-209ENST00000540013 E9PSI1 815 aa9.31□□□□□ -0.92
MRE11-209ENST00000540013 NFX1Q12986 1120 aaKnown RBP9.31□□□□□ -0.92
MRE11-209ENST00000540013 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
MRE11-209ENST00000540013 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
MRE11-209ENST00000540013 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
MRE11-209ENST00000540013 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
MRE11-209ENST00000540013 EPHA4P54764 986 aa9.3□□□□□ -0.92
MRE11-209ENST00000540013 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
MRE11-209ENST00000540013 ZMIZ1Q9ULJ6 1067 aa9.3□□□□□ -0.92
MRE11-209ENST00000540013 USTQ9Y2C2 406 aa9.3□□□□□ -0.92
MRE11-209ENST00000540013 CECR2Q9BXF3 1484 aa9.29□□□□□ -0.92
MRE11-209ENST00000540013 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
MRE11-209ENST00000540013 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
MRE11-209ENST00000540013 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
MRE11-209ENST00000540013 FOXK2Q01167 660 aa9.28□□□□□ -0.92
MRE11-209ENST00000540013 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
MRE11-209ENST00000540013 PSMA6P60900 246 aaKnown RBP9.27□□□□□ -0.93
MRE11-209ENST00000540013 POU4F2Q12837 409 aa9.27□□□□□ -0.93
MRE11-209ENST00000540013 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
MRE11-209ENST00000540013 SLC9A9Q8IVB4 645 aa9.27□□□□□ -0.93
MRE11-209ENST00000540013 STK32AQ8WU08 396 aa9.27□□□□□ -0.93
MRE11-209ENST00000540013 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
MRE11-209ENST00000540013 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 IGFBP4P22692 258 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 SUZ12Q15022 739 aaKnown RBP9.26□□□□□ -0.93
MRE11-209ENST00000540013 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 STAG2Q8N3U4 1231 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 DYRK1BQ9Y463 629 aa9.26□□□□□ -0.93
MRE11-209ENST00000540013 PTSQ03393 145 aa9.25□□□□□ -0.93
MRE11-209ENST00000540013 TEAD4Q15561 434 aa9.25□□□□□ -0.93
MRE11-209ENST00000540013 C4orf17Q53FE4 359 aa9.25□□□□□ -0.93
MRE11-209ENST00000540013 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
MRE11-209ENST00000540013 TSPAN10Q9H1Z9 355 aaPredicted RBP9.25□□□□□ -0.93
MRE11-209ENST00000540013 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
MRE11-209ENST00000540013 SERTM1A2A2V5 107 aa9.24□□□□□ -0.93
MRE11-209ENST00000540013 SOBPA7XYQ1 873 aa9.24□□□□□ -0.93
MRE11-209ENST00000540013 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
MRE11-209ENST00000540013 B4GALNT3Q6L9W6 998 aa9.24□□□□□ -0.93
MRE11-209ENST00000540013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.24□□□□□ -0.93
MRE11-209ENST00000540013 PATL2C9JE40 543 aaKnown RBP9.23□□□□□ -0.93
MRE11-209ENST00000540013 FOXO3O43524 673 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 RHOQP17081 205 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 WEE1P30291 646 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 PLA2G4AP47712 749 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 HIRAP54198 1017 aaPredicted RBP9.23□□□□□ -0.93
MRE11-209ENST00000540013 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
MRE11-209ENST00000540013 ZDHHC3Q9NYG2 299 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 ZNF232Q9UNY5 417 aa9.23□□□□□ -0.93
MRE11-209ENST00000540013 SLC35F4A4IF30 521 aa9.22□□□□□ -0.93
MRE11-209ENST00000540013 TATP17735 454 aaPredicted RBP9.22□□□□□ -0.93
MRE11-209ENST00000540013 NOS2P35228 1153 aa9.22□□□□□ -0.93
MRE11-209ENST00000540013 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
MRE11-209ENST00000540013 VTI1AQ96AJ9 217 aa9.22□□□□□ -0.93
MRE11-209ENST00000540013 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
MRE11-209ENST00000540013 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
MRE11-209ENST00000540013 H7C1W4 665 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 F11P03951 625 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 PHKA2P46019 1235 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 ZNF295-AS1Q8N0V1 137 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
MRE11-209ENST00000540013 GPC6Q9Y625 555 aaPredicted RBP9.21□□□□□ -0.94
MRE11-209ENST00000540013 SENP3-EIF4A1A0A087X0R7 540 aa9.2□□□□□ -0.94
MRE11-209ENST00000540013 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
MRE11-209ENST00000540013 TMEM88BA6NKF7 163 aa9.2□□□□□ -0.94
MRE11-209ENST00000540013 LBRQ14739 615 aaKnown RBP9.2□□□□□ -0.94
MRE11-209ENST00000540013 AIDAQ96BJ3 306 aa9.2□□□□□ -0.94
MRE11-209ENST00000540013 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
MRE11-209ENST00000540013 C21orf2O43822 256 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 TBCELQ5QJ74 424 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
MRE11-209ENST00000540013 GAS2L1Q99501 681 aaPredicted RBP9.19□□□□□ -0.94
MRE11-209ENST00000540013 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
MRE11-209ENST00000540013 EML1O00423 815 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 PRMT3O60678 531 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 ITGA6P23229 1130 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 ATP2B4P23634 1241 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 HIF1AQ16665 826 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 CXXC1Q9P0U4 656 aaPredicted RBP9.18□□□□□ -0.94
MRE11-209ENST00000540013 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
MRE11-209ENST00000540013 PTCD1O75127 700 aaKnown RBP9.17□□□□□ -0.94
MRE11-209ENST00000540013 PPFIA3O75145 1194 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms