RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	CFAP100	Q494V2	611 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC178	Q5BJE1	867 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DUSP27	Q5VZP5	1158 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ANAPC15	P60006	121 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	IQCA1	Q86XH1	822 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NAPB	Q9H115	298 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ANKRD18B	A2A2Z9	1011 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SSR1	P43307	286 aa	Known RBP	10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CENPH	Q9H3R5	247 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LRRFIP2	Q9Y608	721 aa	Known RBP	10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SLC12A7	Q9Y666	1083 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TTC21A	Q8NDW8	1320 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MICALCL	Q6ZW33	695 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC102A	Q96A19	550 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TAOK3	Q9H2K8	898 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	YEATS4	O95619	227 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	KANK3	Q6NY19	840 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DDX11	Q96FC9	970 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CRACR2A	Q9BSW2	395 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GOLGA6L9	A6NEM1	432 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CETN1	Q12798	172 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TMCO3	Q6UWJ1	677 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CACNA2D4	Q7Z3S7	1137 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC61	Q9Y6R9	512 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SFPQ	P23246	707 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MCM4	P33991	863 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MAP2K1	Q02750	393 aa	Predicted RBP	10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ALS2CR12	Q96Q35	445 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FAM107B	Q9H098	131 aa		10.44	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FAM193A	P78312	1265 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	IFIT5	Q13325	482 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CATIP	Q7Z7H3	387 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NUTM1	Q86Y26	1132 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	UBXN4	Q92575	508 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FEZ1	Q99689	392 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GSDMD	P57764	484 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GSTO1	P78417	241 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	RRS1	Q15050	365 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FILIP1	Q7Z7B0	1213 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TMEM57	Q8N5G2	664 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	EVI5L	Q96CN4	794 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	C8orf76	Q96K31	380 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MYD88	Q99836	296 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	KIF5B	P33176	963 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	RPGR	Q92834	1020 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SCLT1	Q96NL6	688 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PLCD4	Q9BRC7	762 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NAA15	Q9BXJ9	866 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CGN	Q9P2M7	1197 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FERMT2	Q96AC1	680 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CC2D2A	Q9P2K1	1620 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ZNF213	O14771	459 aa		10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DDX19A	Q9NUU7	478 aa	Known RBP	10.43	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TOP1	P11387	765 aa	Known RBP	10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CALML4	Q96GE6	196 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LDHC	P07864	332 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PRPF40B	Q6NWY9	871 aa	Known RBP	10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ANKIB1	Q9P2G1	1089 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MAP3K1	Q13233	1512 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PTPN14	Q15678	1187 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FERMT1	Q9BQL6	677 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TRAF1	Q13077	416 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SMC1A	Q14683	1233 aa	Known RBP	10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DYDC1	Q8WWB3	177 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	HMG20B	Q9P0W2	317 aa		10.42	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GOLGA8A	A7E2F4	631 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GOLGA8B	A8MQT2	603 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	FAM177A1	Q8N128	213 aa	Predicted RBP	10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	IL1RAPL2	Q9NP60	686 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC194	A0A1B0GVG4	234 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	IFI16	Q16666	785 aa	Known RBP	10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	BICDL1	Q6ZP65	573 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CAVIN2	O95810	425 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC172	P0C7W6	258 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	CCDC96	Q2M329	555 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	STX1A	Q16623	288 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PCF11	O94913	1555 aa	Known RBP	10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PAFAH1B1	P43034	410 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	KIF18A	Q8NI77	898 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	RMND1	Q9NWS8	449 aa		10.41	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NLRP5	P59047	1200 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NBPF8	Q3BBV2	869 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LUZP1	Q86V48	1076 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ZSCAN30	Q86W11	494 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	EHBP1	Q8NDI1	1231 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DNAAF4	Q8WXU2	420 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	ABCF2	Q9UG63	623 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LIMCH1	Q9UPQ0	1083 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	HOOK3	Q86VS8	718 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PPM1E	Q8WY54	764 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LRRC45	Q96CN5	670 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	SCAF11	Q99590	1463 aa	Known RBP	10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	LAMC3	Q9Y6N6	1575 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	GOLIM4	O00461	696 aa		10.4	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NF2	P35240	595 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms