RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
LRTOMT-215ENST00000538478 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
LRTOMT-215ENST00000538478 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
LRTOMT-215ENST00000538478 VEGFBP49765 207 aa9.47□□□□□ -0.89
LRTOMT-215ENST00000538478 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
LRTOMT-215ENST00000538478 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
LRTOMT-215ENST00000538478 GLTPD2A6NH11 291 aa9.46□□□□□ -0.9
LRTOMT-215ENST00000538478 POTEJP0CG39 1038 aa9.46□□□□□ -0.9
LRTOMT-215ENST00000538478 RASSF7Q02833 373 aa9.46□□□□□ -0.9
LRTOMT-215ENST00000538478 NME9Q86XW9 330 aa9.46□□□□□ -0.9
LRTOMT-215ENST00000538478 TIAM2Q8IVF5 1701 aa9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 MYH14Q7Z406 1995 aaKnown RBP9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 C7P10643 843 aa9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 ITPK1Q13572 414 aa9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 IER5LQ5T953 404 aa9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.45□□□□□ -0.9
LRTOMT-215ENST00000538478 GNPATO15228 680 aa9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 IP6K1Q92551 441 aa9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 PIM2Q9P1W9 311 aa9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-215ENST00000538478 SEC24BO95487 1268 aa9.43□□□□□ -0.9
LRTOMT-215ENST00000538478 CHRNA5P30532 468 aa9.43□□□□□ -0.9
LRTOMT-215ENST00000538478 DALRD3Q5D0E6 543 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-215ENST00000538478 STAC3Q96MF2 364 aa9.43□□□□□ -0.9
LRTOMT-215ENST00000538478 SBNO2Q9Y2G9 1366 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 PASKQ96RG2 1323 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 PLCG2P16885 1265 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 FBLN1P23142 703 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 SIK1P57059 783 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 PIGBQ92521 554 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 CCDC87Q9NVE4 849 aa9.42□□□□□ -0.9
LRTOMT-215ENST00000538478 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 CYP27B1O15528 508 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 GYS1P13807 737 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 TMF1P82094 1093 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
LRTOMT-215ENST00000538478 LMNB1P20700 586 aa9.4□□□□□ -0.9
LRTOMT-215ENST00000538478 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.9
LRTOMT-215ENST00000538478 ARHGEF1Q92888 912 aaKnown RBP9.4□□□□□ -0.9
LRTOMT-215ENST00000538478 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
LRTOMT-215ENST00000538478 NBPF4Q96M43 638 aa9.4□□□□□ -0.9
LRTOMT-215ENST00000538478 DDR1Q08345 913 aa9.39□□□□□ -0.91
LRTOMT-215ENST00000538478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.39□□□□□ -0.91
LRTOMT-215ENST00000538478 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
LRTOMT-215ENST00000538478 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 NFKBIEO00221 500 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 HOXC9P31274 260 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 PARP3Q9Y6F1 533 aa9.38□□□□□ -0.91
LRTOMT-215ENST00000538478 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 TRAPPC3LQ5T215 181 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 MCOLN1Q9GZU1 580 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 CUL9Q8IWT3 2517 aa9.37□□□□□ -0.91
LRTOMT-215ENST00000538478 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
LRTOMT-215ENST00000538478 THSD7BQ9C0I4 1608 aa9.36□□□□□ -0.91
LRTOMT-215ENST00000538478 TMEM88BA6NKF7 163 aa9.36□□□□□ -0.91
LRTOMT-215ENST00000538478 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
LRTOMT-215ENST00000538478 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
LRTOMT-215ENST00000538478 CGNL1Q0VF96 1302 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 WDR33Q9C0J8 1336 aaKnown RBP9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 POTEMA6NI47 508 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 RASSF10A6NK89 507 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 LTBP1Q14766 1721 aa9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 RTCBQ9Y3I0 505 aaKnown RBP9.35□□□□□ -0.91
LRTOMT-215ENST00000538478 SCN4AP35499 1836 aa9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 MAP2K1Q02750 393 aaPredicted RBP9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 PDCD7Q8N8D1 485 aaKnown RBP9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 ADAMTSL1Q8N6G6 1762 aa9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 KDRP35968 1356 aa9.34□□□□□ -0.91
LRTOMT-215ENST00000538478 ADAMTS7Q9UKP4 1686 aa9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 DEFB115Q30KQ5 88 aa9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
LRTOMT-215ENST00000538478 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
LRTOMT-215ENST00000538478 RFC4P35249 363 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms