RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
YBX3-205ENST00000536107 ARAFP10398 606 aa7.54□□□□□ -1.2
YBX3-205ENST00000536107 FGFR3P22607 806 aa7.54□□□□□ -1.2
YBX3-205ENST00000536107 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
YBX3-205ENST00000536107 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
YBX3-205ENST00000536107 TRAK2O60296 914 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 CTBSQ01459 385 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 HMX1Q9NP08 348 aaPredicted RBP7.53□□□□□ -1.2
YBX3-205ENST00000536107 SPATA31D1Q6ZQQ2 1576 aa7.53□□□□□ -1.2
YBX3-205ENST00000536107 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
YBX3-205ENST00000536107 AP1G2O75843 785 aa7.52□□□□□ -1.21
YBX3-205ENST00000536107 SPATA31C1P0DKV0 1188 aa7.52□□□□□ -1.21
YBX3-205ENST00000536107 EFHC2Q5JST6 749 aa7.52□□□□□ -1.21
YBX3-205ENST00000536107 CHSY3Q70JA7 882 aa7.52□□□□□ -1.21
YBX3-205ENST00000536107 CEP170Q5SW79 1584 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 DIP2BQ9P265 1576 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 BNIP3LO60238 219 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 PHKA2P46019 1235 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 SKIV2LQ15477 1246 aaKnown RBP7.51□□□□□ -1.21
YBX3-205ENST00000536107 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.51□□□□□ -1.21
YBX3-205ENST00000536107 OSBPL3Q9H4L5 887 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
YBX3-205ENST00000536107 TSPOAP1O95153 1857 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 SCTRP47872 440 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 CENPCQ03188 943 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 CNKSR1Q969H4 720 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 PCDHB9Q9Y5E1 797 aa7.5□□□□□ -1.21
YBX3-205ENST00000536107 MAPKBP1O60336 1514 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 DYRK3O43781 588 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 GNRH1P01148 92 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 USP17L8P0C7I0 530 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 MSX1P28360 303 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
YBX3-205ENST00000536107 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
YBX3-205ENST00000536107 PRG4Q92954 1404 aaPredicted RBP7.49□□□□□ -1.21
YBX3-205ENST00000536107 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 IL2RAP01589 272 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 CRISPLD1Q9H336 500 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 GOLGA2P5Q9HBQ8 144 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 RAB6BQ9NRW1 208 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 HRH3Q9Y5N1 445 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 TOP2BQ02880 1626 aa7.48□□□□□ -1.21
YBX3-205ENST00000536107 PROCA1Q8NCQ7 364 aaPredicted RBP7.47□□□□□ -1.21
YBX3-205ENST00000536107 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
YBX3-205ENST00000536107 WDR97A6NE52 1622 aa7.46□□□□□ -1.21
YBX3-205ENST00000536107 ADH6P28332 368 aa7.46□□□□□ -1.22
YBX3-205ENST00000536107 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
YBX3-205ENST00000536107 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
YBX3-205ENST00000536107 SH3D19Q5HYK7 790 aa7.46□□□□□ -1.22
YBX3-205ENST00000536107 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
YBX3-205ENST00000536107 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
YBX3-205ENST00000536107 AVENQ9NQS1 362 aaPredicted RBP7.46□□□□□ -1.22
YBX3-205ENST00000536107 TOP2AP11388 1531 aaKnown RBP7.46□□□□□ -1.22
YBX3-205ENST00000536107 FGD5Q6ZNL6 1462 aa7.45□□□□□ -1.22
YBX3-205ENST00000536107 MCCD1P59942 119 aaPredicted RBP7.45□□□□□ -1.22
YBX3-205ENST00000536107 XAGE2Q96GT9 111 aa7.45□□□□□ -1.22
YBX3-205ENST00000536107 FHDC1Q9C0D6 1143 aaPredicted RBP7.45□□□□□ -1.22
YBX3-205ENST00000536107 KLF15Q9UIH9 416 aa7.45□□□□□ -1.22
YBX3-205ENST00000536107 PCDHB11Q9Y5F2 797 aa7.45□□□□□ -1.22
YBX3-205ENST00000536107 TTBK1Q5TCY1 1321 aaPredicted RBP7.45□□□□□ -1.22
YBX3-205ENST00000536107 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 CCDC88BA6NC98 1476 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 GRIN2AQ12879 1464 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 FBXO45P0C2W1 286 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 HSPA2P54652 639 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 PRSS36Q5K4E3 855 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 TMEM214Q6NUQ4 689 aaKnown RBP7.44□□□□□ -1.22
YBX3-205ENST00000536107 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 DNAAF2Q9NVR5 837 aaKnown RBP7.44□□□□□ -1.22
YBX3-205ENST00000536107 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
YBX3-205ENST00000536107 SPDYE3A6NKU9 549 aa7.43□□□□□ -1.22
YBX3-205ENST00000536107 FAM182BQ5T319 152 aa7.43□□□□□ -1.22
YBX3-205ENST00000536107 NUP160Q12769 1436 aa7.43□□□□□ -1.22
YBX3-205ENST00000536107 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
YBX3-205ENST00000536107 LRP8Q14114 963 aa7.42□□□□□ -1.22
YBX3-205ENST00000536107 RHBDD1Q8TEB9 315 aa7.42□□□□□ -1.22
YBX3-205ENST00000536107 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
YBX3-205ENST00000536107 ZCCHC2Q9C0B9 1178 aaKnown RBP7.42□□□□□ -1.22
YBX3-205ENST00000536107 NLRP8Q86W28 1048 aa7.41□□□□□ -1.22
YBX3-205ENST00000536107 APBA3O96018 575 aa7.4□□□□□ -1.22
YBX3-205ENST00000536107 PRRT3Q5FWE3 981 aa7.4□□□□□ -1.22
YBX3-205ENST00000536107 PPARGC1BQ86YN6 1023 aaKnown RBP7.4□□□□□ -1.22
YBX3-205ENST00000536107 ATP1B4Q9UN42 357 aaPredicted RBP7.4□□□□□ -1.22
YBX3-205ENST00000536107 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
YBX3-205ENST00000536107 PTPRMP28827 1452 aa7.38□□□□□ -1.23
YBX3-205ENST00000536107 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
YBX3-205ENST00000536107 TNP2Q05952 138 aa7.38□□□□□ -1.23
YBX3-205ENST00000536107 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
YBX3-205ENST00000536107 HCN2Q9UL51 889 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms