RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 LETM1O95202 739 aaPredicted RBP13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 CHMLP26374 656 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 FLT4P35916 1363 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
AC048338.1-201ENST00000535844 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
AC048338.1-201ENST00000535844 NALCNQ8IZF0 1738 aa13.54□□□□□ -0.24
AC048338.1-201ENST00000535844 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 GNAI3P08754 354 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 CCDC30Q5VVM6 783 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 PHAXQ9H814 394 aaKnown RBP13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 TOPAZ1Q8N9V7 1692 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 DTNBO60941 627 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 MCCP23508 829 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 NLRP6P59044 892 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 PTPRUQ92729 1446 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
AC048338.1-201ENST00000535844 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.24
AC048338.1-201ENST00000535844 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.24
AC048338.1-201ENST00000535844 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 KDRP35968 1356 aa13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 USP44Q9H0E7 712 aa13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 BCCIPQ9P287 314 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC048338.1-201ENST00000535844 BRD1O95696 1058 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 CCDC94Q9BW85 323 aaPredicted RBP13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 LRSAM1Q6UWE0 723 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
AC048338.1-201ENST00000535844 RGPD8O14715 1765 aaPredicted RBP13.5□□□□□ -0.25
AC048338.1-201ENST00000535844 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
AC048338.1-201ENST00000535844 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
AC048338.1-201ENST00000535844 ZBTB7CA1YPR0 619 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 CUL4AQ13619 759 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 FAM208AQ9UK61 1670 aaKnown RBP13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 MPNDQ8N594 471 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
AC048338.1-201ENST00000535844 ANXA1P04083 346 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 IRX3P78415 501 aaPredicted RBP13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 XRN1Q8IZH2 1706 aaKnown RBP13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 HOXC9P31274 260 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 MCM2P49736 904 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
AC048338.1-201ENST00000535844 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 NBPF7P0C2Y1 421 aaPredicted RBP13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 CBX1P83916 185 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 MBD3O95983 291 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 CPA1P15085 419 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 ANAPC15P60006 121 aa13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
AC048338.1-201ENST00000535844 PIK3C2AO00443 1686 aa13.46□□□□□ -0.25
AC048338.1-201ENST00000535844 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
AC048338.1-201ENST00000535844 USP48Q86UV5 1035 aa13.46□□□□□ -0.26
AC048338.1-201ENST00000535844 ABTB2Q8N961 1025 aa13.46□□□□□ -0.26
AC048338.1-201ENST00000535844 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.26
AC048338.1-201ENST00000535844 TCHHQ07283 1943 aa13.46□□□□□ -0.26
AC048338.1-201ENST00000535844 CWC27Q6UX04 472 aaKnown RBP13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 TSC1Q92574 1164 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 HSPA4P34932 840 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 INTS4Q96HW7 963 aaKnown RBP13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 CHPF2Q9P2E5 772 aa13.45□□□□□ -0.26
AC048338.1-201ENST00000535844 KCNQ3O43525 872 aa13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 ZBTB22O15209 634 aa13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 TSPY26PQ9H489 355 aa13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
AC048338.1-201ENST00000535844 DIP2AQ14689 1571 aa13.43□□□□□ -0.26
AC048338.1-201ENST00000535844 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
AC048338.1-201ENST00000535844 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms