RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 LRRC59Q96AG4 307 aaKnown RBP20.98■□□□□ 0.95
SIPA1-209ENST00000534313 SETD1BQ9UPS6 1966 aaKnown RBP20.98■□□□□ 0.95
SIPA1-209ENST00000534313 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
SIPA1-209ENST00000534313 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
SIPA1-209ENST00000534313 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
SIPA1-209ENST00000534313 R3HCC1Q9Y3T6 440 aaKnown RBP20.97■□□□□ 0.95
SIPA1-209ENST00000534313 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
SIPA1-209ENST00000534313 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
SIPA1-209ENST00000534313 RHPN1Q8TCX5 695 aa20.96■□□□□ 0.95
SIPA1-209ENST00000534313 PPP1R9BQ96SB3 815 aa20.96■□□□□ 0.95
SIPA1-209ENST00000534313 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
SIPA1-209ENST00000534313 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
SIPA1-209ENST00000534313 OS9Q13438 667 aaPredicted RBP20.96■□□□□ 0.95
SIPA1-209ENST00000534313 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.95
SIPA1-209ENST00000534313 CPA1P15085 419 aa20.95■□□□□ 0.94
SIPA1-209ENST00000534313 STAP2Q9UGK3 403 aa20.95■□□□□ 0.94
SIPA1-209ENST00000534313 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
SIPA1-209ENST00000534313 PIK3C2AO00443 1686 aa20.95■□□□□ 0.94
SIPA1-209ENST00000534313 CWC27Q6UX04 472 aaKnown RBP20.95■□□□□ 0.94
SIPA1-209ENST00000534313 SSH3Q8TE77 659 aa20.95■□□□□ 0.94
SIPA1-209ENST00000534313 BRD1O95696 1058 aa20.94■□□□□ 0.94
SIPA1-209ENST00000534313 PTMAP06454 111 aaKnown RBP20.94■□□□□ 0.94
SIPA1-209ENST00000534313 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
SIPA1-209ENST00000534313 DNTTIP2Q5QJE6 756 aaKnown RBP20.94■□□□□ 0.94
SIPA1-209ENST00000534313 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
SIPA1-209ENST00000534313 GADD45BO75293 160 aaPredicted RBP20.93■□□□□ 0.94
SIPA1-209ENST00000534313 THEMISQ8N1K5 641 aaPredicted RBP20.93■□□□□ 0.94
SIPA1-209ENST00000534313 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
SIPA1-209ENST00000534313 CUL4AQ13619 759 aa20.92■□□□□ 0.94
SIPA1-209ENST00000534313 ZSCAN30Q86W11 494 aa20.92■□□□□ 0.94
SIPA1-209ENST00000534313 PI4K2BQ8TCG2 481 aa20.92■□□□□ 0.94
SIPA1-209ENST00000534313 MCM2P49736 904 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 RASEFQ8IZ41 740 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 DNAAF4Q8WXU2 420 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 TEFQ10587 303 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 MPNDQ8N594 471 aa20.91■□□□□ 0.94
SIPA1-209ENST00000534313 PA2G4Q9UQ80 394 aaKnown RBP20.91■□□□□ 0.94
SIPA1-209ENST00000534313 PHF8Q9UPP1 1060 aa20.9■□□□□ 0.94
SIPA1-209ENST00000534313 ZNF530Q6P9A1 599 aaPredicted RBP20.9■□□□□ 0.94
SIPA1-209ENST00000534313 LRSAM1Q6UWE0 723 aa20.9■□□□□ 0.94
SIPA1-209ENST00000534313 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
SIPA1-209ENST00000534313 ANAPC15P60006 121 aa20.9■□□□□ 0.94
SIPA1-209ENST00000534313 KIF13AQ9H1H9 1805 aa20.9■□□□□ 0.94
SIPA1-209ENST00000534313 HSPA4P34932 840 aa20.89■□□□□ 0.94
SIPA1-209ENST00000534313 ESCO1Q5FWF5 840 aa20.89■□□□□ 0.94
SIPA1-209ENST00000534313 BEND3Q5T5X7 828 aa20.89■□□□□ 0.94
SIPA1-209ENST00000534313 NWD1Q149M9 1564 aa20.89■□□□□ 0.93
SIPA1-209ENST00000534313 PROSER3Q2NL68 480 aa20.89■□□□□ 0.93
SIPA1-209ENST00000534313 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.93
SIPA1-209ENST00000534313 XRN1Q8IZH2 1706 aaKnown RBP20.89■□□□□ 0.93
SIPA1-209ENST00000534313 TPM2P07951 284 aa20.88■□□□□ 0.93
SIPA1-209ENST00000534313 POLA2Q14181 598 aa20.88■□□□□ 0.93
SIPA1-209ENST00000534313 SNX14Q9Y5W7 946 aa20.88■□□□□ 0.93
SIPA1-209ENST00000534313 FAM208AQ9UK61 1670 aaKnown RBP20.88■□□□□ 0.93
SIPA1-209ENST00000534313 PSME1Q06323 249 aa20.88■□□□□ 0.93
SIPA1-209ENST00000534313 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
SIPA1-209ENST00000534313 SGSM2O43147 1006 aa20.87■□□□□ 0.93
SIPA1-209ENST00000534313 RAB11FIP3O75154 756 aa20.87■□□□□ 0.93
SIPA1-209ENST00000534313 USP48Q86UV5 1035 aa20.87■□□□□ 0.93
SIPA1-209ENST00000534313 AK2P54819 239 aa20.86■□□□□ 0.93
SIPA1-209ENST00000534313 AIMP1Q12904 312 aaKnown RBP20.86■□□□□ 0.93
SIPA1-209ENST00000534313 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
SIPA1-209ENST00000534313 IP6K1Q92551 441 aa20.86■□□□□ 0.93
SIPA1-209ENST00000534313 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
SIPA1-209ENST00000534313 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
SIPA1-209ENST00000534313 INTS4Q96HW7 963 aaKnown RBP20.85■□□□□ 0.93
SIPA1-209ENST00000534313 LSG1Q9H089 658 aaKnown RBP20.85■□□□□ 0.93
SIPA1-209ENST00000534313 MBD3O95983 291 aa20.84■□□□□ 0.93
SIPA1-209ENST00000534313 RAD50Q92878 1312 aa20.84■□□□□ 0.93
SIPA1-209ENST00000534313 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
SIPA1-209ENST00000534313 LARGE1O95461 756 aa20.84■□□□□ 0.93
SIPA1-209ENST00000534313 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
SIPA1-209ENST00000534313 PLCB2Q00722 1185 aa20.83■□□□□ 0.93
SIPA1-209ENST00000534313 PTH1RQ03431 593 aa20.83■□□□□ 0.93
SIPA1-209ENST00000534313 DIAPH3Q9NSV4 1193 aa20.83■□□□□ 0.93
SIPA1-209ENST00000534313 ADCY9O60503 1353 aa20.83■□□□□ 0.92
SIPA1-209ENST00000534313 RUFY3Q7L099 469 aa20.83■□□□□ 0.92
SIPA1-209ENST00000534313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.83■□□□□ 0.92
SIPA1-209ENST00000534313 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.82■□□□□ 0.92
SIPA1-209ENST00000534313 ADCK5Q3MIX3 580 aa20.82■□□□□ 0.92
SIPA1-209ENST00000534313 PRPF40BQ6NWY9 871 aaKnown RBP20.82■□□□□ 0.92
SIPA1-209ENST00000534313 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
SIPA1-209ENST00000534313 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
SIPA1-209ENST00000534313 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
SIPA1-209ENST00000534313 AOX1Q06278 1338 aa20.82■□□□□ 0.92
SIPA1-209ENST00000534313 CLASRPQ8N2M8 674 aaKnown RBP20.81■□□□□ 0.92
SIPA1-209ENST00000534313 SIL1Q9H173 461 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 BABAM1Q9NWV8 329 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 WDR33Q9C0J8 1336 aaKnown RBP20.81■□□□□ 0.92
SIPA1-209ENST00000534313 FIBPO43427 364 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 CCDC83Q8IWF9 413 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 PDLIM2Q96JY6 352 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 TSPY26PQ9H489 355 aa20.81■□□□□ 0.92
SIPA1-209ENST00000534313 ARHGAP23Q9P227 1491 aa20.8■□□□□ 0.92
SIPA1-209ENST00000534313 RPAP1Q9BWH6 1393 aaPredicted RBP20.8■□□□□ 0.92
SIPA1-209ENST00000534313 JAKMIP1Q96N16 626 aaKnown RBP20.8■□□□□ 0.92
SIPA1-209ENST00000534313 CCDC8Q9H0W5 538 aaPredicted RBP20.8■□□□□ 0.92
SIPA1-209ENST00000534313 PDCL3Q9H2J4 239 aa20.8■□□□□ 0.92
SIPA1-209ENST00000534313 IFIT2P09913 472 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms