RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L21D6R901 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 RNPC3Q96LT9 517 aaKnown RBP7.8□□□□□ -1.16
CHEK1-216ENST00000534070 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.8□□□□□ -1.16
CHEK1-216ENST00000534070 RBL2Q08999 1139 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 SEMA3FQ13275 785 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
CHEK1-216ENST00000534070 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
CHEK1-216ENST00000534070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.8□□□□□ -1.16
CHEK1-216ENST00000534070 PRPF38AQ8NAV1 312 aaKnown RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 PNISRQ8TF01 805 aaKnown RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 EPRSP07814 1512 aaKnown RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 NUP153P49790 1475 aaKnown RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 CD53P19397 219 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 MAPK8P45983 427 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 ARHGAP4P98171 946 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 L3MBTL3Q96JM7 780 aaPredicted RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 DUSP9Q99956 384 aaKnown RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 SENP3-EIF4A1A0A087X0R7 540 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 PPP4R4Q6NUP7 873 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 SKAP1Q86WV1 359 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 SDR16C5Q8N3Y7 309 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 RNF34Q969K3 372 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 CCDC85AQ96PX6 553 aaPredicted RBP7.79□□□□□ -1.16
CHEK1-216ENST00000534070 TGIF2Q9GZN2 237 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 KIF27Q86VH2 1401 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 GOLGA3Q08378 1498 aa7.79□□□□□ -1.16
CHEK1-216ENST00000534070 TMEM131LA2VDJ0 1609 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 FAM163BP0C2L3 166 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 AS3MTQ9HBK9 375 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 PTPRHQ9HD43 1115 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 NRDCO43847 1150 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 LONRF1Q17RB8 773 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 GOLGA6CA6NDK9 693 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 GOLGA6DP0CG33 693 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 CDKN1CP49918 316 aaPredicted RBP7.78□□□□□ -1.16
CHEK1-216ENST00000534070 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 ARID5AQ03989 594 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 CCDC96Q2M329 555 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 NGDNQ8NEJ9 315 aaKnown RBP7.78□□□□□ -1.16
CHEK1-216ENST00000534070 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
CHEK1-216ENST00000534070 GOLGA6AQ9NYA3 693 aa7.78□□□□□ -1.16
CHEK1-216ENST00000534070 ARHGEF12Q9NZN5 1544 aa7.77□□□□□ -1.16
CHEK1-216ENST00000534070 KDM6BO15054 1643 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 HCLS1P14317 486 aaPredicted RBP7.77□□□□□ -1.17
CHEK1-216ENST00000534070 TOMM20Q15388 145 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 MPNDQ8N594 471 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 SLC39A13Q96H72 371 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 VTI1BQ9UEU0 232 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 DIS3Q9Y2L1 958 aaKnown RBP7.77□□□□□ -1.17
CHEK1-216ENST00000534070 EMILIN1Q9Y6C2 1016 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 USP54Q70EL1 1684 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 FOSP01100 380 aaPredicted RBP7.77□□□□□ -1.17
CHEK1-216ENST00000534070 RASA1P20936 1047 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 ZNF76P36508 570 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 RSBN1LQ6PCB5 846 aaPredicted RBP7.77□□□□□ -1.17
CHEK1-216ENST00000534070 PAF1Q8N7H5 531 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 HLA-CQ95604 372 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.77□□□□□ -1.17
CHEK1-216ENST00000534070 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 SAMD9LQ8IVG5 1584 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 LIG1P18858 919 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 FAM174AQ8TBP5 190 aa7.77□□□□□ -1.17
CHEK1-216ENST00000534070 MADDQ8WXG6 1647 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 LDHCP07864 332 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
CHEK1-216ENST00000534070 PUF60Q9UHX1 559 aaKnown RBP7.76□□□□□ -1.17
CHEK1-216ENST00000534070 DCTN4Q9UJW0 460 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 WASHC2AQ641Q2 1341 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 PLB1Q6P1J6 1458 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 CC2D1AQ6P1N0 951 aaPredicted RBP7.76□□□□□ -1.17
CHEK1-216ENST00000534070 C14orf80Q86SX3 495 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 SRPK1Q96SB4 655 aaKnown RBP7.76□□□□□ -1.17
CHEK1-216ENST00000534070 SWAP70Q9UH65 585 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 MRVI1Q9Y6F6 885 aa7.76□□□□□ -1.17
CHEK1-216ENST00000534070 NPHP1O15259 732 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 LILRB3O75022 631 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 PHF14O94880 888 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 BSDC1Q9NW68 430 aaPredicted RBP7.75□□□□□ -1.17
CHEK1-216ENST00000534070 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
CHEK1-216ENST00000534070 LMTK2Q8IWU2 1503 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 DALRD3Q5D0E6 543 aaKnown RBP7.75□□□□□ -1.17
CHEK1-216ENST00000534070 FAM221BA6H8Z2 402 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 XPCQ01831 940 aaPredicted RBP7.75□□□□□ -1.17
CHEK1-216ENST00000534070 PTK7Q13308 1070 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 ZNF518AQ6AHZ1 1483 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 TMC7Q7Z402 723 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms