RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
CTSB-225ENST00000532409 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
CTSB-225ENST00000532409 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
CTSB-225ENST00000532409 FKBP8Q14318 412 aa20.52■□□□□ 0.88
CTSB-225ENST00000532409 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
CTSB-225ENST00000532409 ADAMTS8Q9UP79 889 aa20.52■□□□□ 0.88
CTSB-225ENST00000532409 WDR43Q15061 677 aaKnown RBP eCLIP20.51■□□□□ 0.87
CTSB-225ENST00000532409 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
CTSB-225ENST00000532409 COL15A1P39059 1388 aa20.5■□□□□ 0.87
CTSB-225ENST00000532409 STARD3NLO95772 234 aa20.5■□□□□ 0.87
CTSB-225ENST00000532409 A1BGP04217 495 aa20.5■□□□□ 0.87
CTSB-225ENST00000532409 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
CTSB-225ENST00000532409 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
CTSB-225ENST00000532409 USP16Q9Y5T5 823 aa20.5■□□□□ 0.87
CTSB-225ENST00000532409 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
CTSB-225ENST00000532409 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
CTSB-225ENST00000532409 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
CTSB-225ENST00000532409 RIPK4P57078 832 aa20.49■□□□□ 0.87
CTSB-225ENST00000532409 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
CTSB-225ENST00000532409 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
CTSB-225ENST00000532409 WWC3Q9ULE0 1092 aa20.49■□□□□ 0.87
CTSB-225ENST00000532409 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
CTSB-225ENST00000532409 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
CTSB-225ENST00000532409 ZNF330Q9Y3S2 320 aaPredicted RBP20.48■□□□□ 0.87
CTSB-225ENST00000532409 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
CTSB-225ENST00000532409 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
CTSB-225ENST00000532409 DDR1Q08345 913 aa20.47■□□□□ 0.87
CTSB-225ENST00000532409 GPR162Q16538 588 aa20.47■□□□□ 0.87
CTSB-225ENST00000532409 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
CTSB-225ENST00000532409 ZPR1O75312 459 aa20.46■□□□□ 0.87
CTSB-225ENST00000532409 YBX3P16989 372 aaKnown RBP eCLIP20.46■□□□□ 0.871e-9■■□□□ 13.9
CTSB-225ENST00000532409 TEX13AQ9BXU3 409 aaPredicted RBP20.46■□□□□ 0.87
CTSB-225ENST00000532409 NARFQ9UHQ1 456 aa20.46■□□□□ 0.87
CTSB-225ENST00000532409 SNRPA1P09661 255 aaKnown RBP20.45■□□□□ 0.86
CTSB-225ENST00000532409 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
CTSB-225ENST00000532409 PARP3Q9Y6F1 533 aa20.44■□□□□ 0.86
CTSB-225ENST00000532409 TBC1D2BQ9UPU7 963 aa20.43■□□□□ 0.86
CTSB-225ENST00000532409 C10orf71Q711Q0 1435 aa20.43■□□□□ 0.86
CTSB-225ENST00000532409 KIAA1551Q9HCM1 1747 aa20.42■□□□□ 0.86
CTSB-225ENST00000532409 KIF13BQ9NQT8 1826 aa20.42■□□□□ 0.86
CTSB-225ENST00000532409 TM4SF1P30408 202 aa20.42■□□□□ 0.86
CTSB-225ENST00000532409 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
CTSB-225ENST00000532409 NFIXQ14938 502 aa20.42■□□□□ 0.86
CTSB-225ENST00000532409 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
CTSB-225ENST00000532409 NBPF26B4DH59 902 aa20.41■□□□□ 0.86
CTSB-225ENST00000532409 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
CTSB-225ENST00000532409 YY1P25490 414 aa20.41■□□□□ 0.86
CTSB-225ENST00000532409 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
CTSB-225ENST00000532409 NBPF10Q6P3W6 841 aaKnown RBP20.41■□□□□ 0.86
CTSB-225ENST00000532409 NBPF15Q8N660 670 aa20.41■□□□□ 0.86
CTSB-225ENST00000532409 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
CTSB-225ENST00000532409 PXDNLA1KZ92 1463 aa20.41■□□□□ 0.86
CTSB-225ENST00000532409 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
CTSB-225ENST00000532409 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
CTSB-225ENST00000532409 GIGYF1O75420 1035 aaPredicted RBP20.4■□□□□ 0.86
CTSB-225ENST00000532409 SCN7AQ01118 1682 aa20.4■□□□□ 0.86
CTSB-225ENST00000532409 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
CTSB-225ENST00000532409 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
CTSB-225ENST00000532409 LMOD3Q0VAK6 560 aa20.39■□□□□ 0.85
CTSB-225ENST00000532409 BICDL1Q6ZP65 573 aa20.39■□□□□ 0.85
CTSB-225ENST00000532409 A0A087WZG4 1122 aa20.38■□□□□ 0.85
CTSB-225ENST00000532409 A0A0G2JLW4 131 aa20.38■□□□□ 0.85
CTSB-225ENST00000532409 APAF1O14727 1248 aa20.38■□□□□ 0.85
CTSB-225ENST00000532409 ANP32CO43423 234 aa20.38■□□□□ 0.85
CTSB-225ENST00000532409 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
CTSB-225ENST00000532409 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
CTSB-225ENST00000532409 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
CTSB-225ENST00000532409 DPEP1P16444 411 aa20.36■□□□□ 0.85
CTSB-225ENST00000532409 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
CTSB-225ENST00000532409 KRT24Q2M2I5 525 aa20.35■□□□□ 0.85
CTSB-225ENST00000532409 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
CTSB-225ENST00000532409 BCORQ6W2J9 1755 aa20.35■□□□□ 0.85
CTSB-225ENST00000532409 CHD4Q14839 1912 aa20.35■□□□□ 0.85
CTSB-225ENST00000532409 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
CTSB-225ENST00000532409 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
CTSB-225ENST00000532409 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
CTSB-225ENST00000532409 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
CTSB-225ENST00000532409 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.85
CTSB-225ENST00000532409 SERPINB2P05120 415 aa20.33■□□□□ 0.85
CTSB-225ENST00000532409 CHRNA5P30532 468 aa20.33■□□□□ 0.85
CTSB-225ENST00000532409 TGFB2P61812 414 aa20.33■□□□□ 0.85
CTSB-225ENST00000532409 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
CTSB-225ENST00000532409 CHL1O00533 1208 aa20.32■□□□□ 0.84
CTSB-225ENST00000532409 KCNA3P22001 575 aa20.32■□□□□ 0.84
CTSB-225ENST00000532409 MYL6BP14649 208 aa20.31■□□□□ 0.84
CTSB-225ENST00000532409 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
CTSB-225ENST00000532409 GRIN3BO60391 1043 aa20.3■□□□□ 0.84
CTSB-225ENST00000532409 EIF2S2P20042 333 aaKnown RBP20.3■□□□□ 0.84
CTSB-225ENST00000532409 BABAM1Q9NWV8 329 aa20.3■□□□□ 0.84
CTSB-225ENST00000532409 ANXA1P04083 346 aa20.29■□□□□ 0.84
CTSB-225ENST00000532409 HLFQ16534 295 aa20.29■□□□□ 0.84
CTSB-225ENST00000532409 TTLL7Q6ZT98 887 aa20.29■□□□□ 0.84
CTSB-225ENST00000532409 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
CTSB-225ENST00000532409 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
CTSB-225ENST00000532409 PROSER3Q2NL68 480 aa20.28■□□□□ 0.84
CTSB-225ENST00000532409 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
CTSB-225ENST00000532409 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
CTSB-225ENST00000532409 PDIA6Q15084 440 aa20.26■□□□□ 0.83
CTSB-225ENST00000532409 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
CTSB-225ENST00000532409 MBIPQ9NS73 344 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms