RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
ATM-217ENST00000531957 ARAFP10398 606 aa7.36□□□□□ -1.23
ATM-217ENST00000531957 COL8A1P27658 744 aa7.36□□□□□ -1.23
ATM-217ENST00000531957 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
ATM-217ENST00000531957 DEPDC4Q8N2C3 294 aa7.36□□□□□ -1.23
ATM-217ENST00000531957 C1orf216Q8TAB5 229 aa7.36□□□□□ -1.23
ATM-217ENST00000531957 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
ATM-217ENST00000531957 NCOA4Q13772 614 aa7.35□□□□□ -1.23
ATM-217ENST00000531957 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
ATM-217ENST00000531957 NDFIP2Q9NV92 336 aa7.35□□□□□ -1.23
ATM-217ENST00000531957 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
ATM-217ENST00000531957 INHAP05111 366 aa7.34□□□□□ -1.23
ATM-217ENST00000531957 EPXP11678 715 aa7.34□□□□□ -1.23
ATM-217ENST00000531957 PLA2G4AP47712 749 aa7.34□□□□□ -1.23
ATM-217ENST00000531957 EML3Q32P44 896 aa7.34□□□□□ -1.23
ATM-217ENST00000531957 USP17L5A8MUK1 530 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 BNIP3LO60238 219 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 DGKGP49619 791 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 HDGFL1Q5TGJ6 251 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 NLRP8Q86W28 1048 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 UCN2Q96RP3 112 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 AVENQ9NQS1 362 aaPredicted RBP7.33□□□□□ -1.24
ATM-217ENST00000531957 PCDHGA11Q9Y5H2 935 aa7.33□□□□□ -1.24
ATM-217ENST00000531957 GTF2IP78347 998 aa7.32□□□□□ -1.24
ATM-217ENST00000531957 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
ATM-217ENST00000531957 LINC00114Q6XXX2 140 aa7.32□□□□□ -1.24
ATM-217ENST00000531957 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
ATM-217ENST00000531957 C2CD2LO14523 706 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
ATM-217ENST00000531957 ADH6P28332 368 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 SMTNP53814 917 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 PSME1Q06323 249 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
ATM-217ENST00000531957 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
ATM-217ENST00000531957 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
ATM-217ENST00000531957 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 ATXN7O15265 892 aaPredicted RBP7.3□□□□□ -1.24
ATM-217ENST00000531957 FURINP09958 794 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 ATP4AP20648 1035 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 CTBSQ01459 385 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 FNBP4Q8N3X1 1017 aaPredicted RBP7.3□□□□□ -1.24
ATM-217ENST00000531957 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
ATM-217ENST00000531957 DNAAF2Q9NVR5 837 aaKnown RBP7.3□□□□□ -1.24
ATM-217ENST00000531957 USP17L3A6NCW0 530 aa7.29□□□□□ -1.24
ATM-217ENST00000531957 USP17L4A6NCW7 530 aa7.29□□□□□ -1.24
ATM-217ENST00000531957 TATP17735 454 aaPredicted RBP7.29□□□□□ -1.24
ATM-217ENST00000531957 USP17L2Q6R6M4 530 aa7.29□□□□□ -1.24
ATM-217ENST00000531957 USP17L1Q7RTZ2 530 aa7.29□□□□□ -1.24
ATM-217ENST00000531957 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATM-217ENST00000531957 C1QTNF9BB2RNN3 333 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 CHSY3Q70JA7 882 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 Q8N3U1 123 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 GLMNQ92990 594 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 ZCCHC2Q9C0B9 1178 aaKnown RBP7.28□□□□□ -1.24
ATM-217ENST00000531957 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
ATM-217ENST00000531957 A6NJY4 79 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 FAM157BP0CG42 384 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 AIDAQ96BJ3 306 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 SLC4A9Q96Q91 983 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 IQSEC3Q9UPP2 1182 aaPredicted RBP7.27□□□□□ -1.25
ATM-217ENST00000531957 KIAA1024Q9UPX6 916 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 PARP3Q9Y6F1 533 aa7.27□□□□□ -1.25
ATM-217ENST00000531957 DCDC2BA2VCK2 349 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 ATP9BO43861 1147 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
ATM-217ENST00000531957 MAPTP10636 758 aaKnown RBP7.26□□□□□ -1.25
ATM-217ENST00000531957 CLDN10P78369 228 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 MTFR1Q15390 333 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 ARSJQ5FYB0 599 aaPredicted RBP7.26□□□□□ -1.25
ATM-217ENST00000531957 TBCELQ5QJ74 424 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 CD163Q86VB7 1156 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 ZNF295-AS1Q8N0V1 137 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
ATM-217ENST00000531957 A0A1W2PNR3 127 aa7.25□□□□□ -1.25
ATM-217ENST00000531957 KHNYNO15037 678 aaKnown RBP7.25□□□□□ -1.25
ATM-217ENST00000531957 CHRNA4P43681 627 aa7.25□□□□□ -1.25
ATM-217ENST00000531957 TNP2Q05952 138 aa7.25□□□□□ -1.25
ATM-217ENST00000531957 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
ATM-217ENST00000531957 TPCN2Q8NHX9 752 aa7.25□□□□□ -1.25
ATM-217ENST00000531957 CABP1Q9NZU7 370 aa7.25□□□□□ -1.25
ATM-217ENST00000531957 SPDYE3A6NKU9 549 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 CDK2AP1O14519 115 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 SPATA31C1P0DKV0 1188 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 CD33P20138 364 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 LAMC2Q13753 1193 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 FCHSD1Q86WN1 690 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 TNS4Q8IZW8 715 aa7.24□□□□□ -1.25
ATM-217ENST00000531957 TFIP11Q9UBB9 837 aaKnown RBP7.24□□□□□ -1.25
ATM-217ENST00000531957 BACH1O14867 736 aa7.23□□□□□ -1.25
ATM-217ENST00000531957 ZBTB7BO15156 539 aaPredicted RBP7.23□□□□□ -1.25
ATM-217ENST00000531957 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
ATM-217ENST00000531957 TRIM50Q86XT4 487 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms