RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 NCLP19338 710 aaKnown RBP23.34■■□□□ 1.33
LTBP3-217ENST00000530785 C16orf71Q8IYS4 520 aaPredicted RBP23.34■■□□□ 1.33
LTBP3-217ENST00000530785 BABAM1Q9NWV8 329 aa23.33■■□□□ 1.33
LTBP3-217ENST00000530785 AK9Q5TCS8 1911 aa23.33■■□□□ 1.32
LTBP3-217ENST00000530785 CDC45O75419 566 aa23.32■■□□□ 1.32
LTBP3-217ENST00000530785 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-217ENST00000530785 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-217ENST00000530785 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
LTBP3-217ENST00000530785 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-217ENST00000530785 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
LTBP3-217ENST00000530785 TTC22Q5TAA0 569 aa23.32■■□□□ 1.32
LTBP3-217ENST00000530785 SOS1Q07889 1333 aaPredicted RBP23.31■■□□□ 1.32
LTBP3-217ENST00000530785 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
LTBP3-217ENST00000530785 MYRIPQ8NFW9 859 aa23.31■■□□□ 1.32
LTBP3-217ENST00000530785 APBB1O00213 710 aa23.31■■□□□ 1.32
LTBP3-217ENST00000530785 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
LTBP3-217ENST00000530785 LRSAM1Q6UWE0 723 aa23.3■■□□□ 1.32
LTBP3-217ENST00000530785 SLIT3O75094 1523 aa23.3■■□□□ 1.32
LTBP3-217ENST00000530785 GPT2Q8TD30 523 aa23.3■■□□□ 1.32
LTBP3-217ENST00000530785 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
LTBP3-217ENST00000530785 N4BP2Q86UW6 1770 aaPredicted RBP23.29■■□□□ 1.32
LTBP3-217ENST00000530785 HMMRO75330 724 aa23.29■■□□□ 1.32
LTBP3-217ENST00000530785 GCP02774 474 aa23.27■■□□□ 1.32
LTBP3-217ENST00000530785 LMO7Q8WWI1 1683 aa23.27■■□□□ 1.32
LTBP3-217ENST00000530785 GNAI2P04899 355 aa23.27■■□□□ 1.32
LTBP3-217ENST00000530785 RABEP1Q15276 862 aa23.27■■□□□ 1.32
LTBP3-217ENST00000530785 GTPBP4Q9BZE4 634 aaKnown RBP23.27■■□□□ 1.32
LTBP3-217ENST00000530785 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-217ENST00000530785 LGR6Q9HBX8 967 aa23.27■■□□□ 1.32
LTBP3-217ENST00000530785 RBM27Q9P2N5 1060 aaKnown RBP23.27■■□□□ 1.32
LTBP3-217ENST00000530785 TRPM3Q9HCF6 1732 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-217ENST00000530785 KDM3BQ7LBC6 1761 aa23.26■■□□□ 1.31
LTBP3-217ENST00000530785 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
LTBP3-217ENST00000530785 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
LTBP3-217ENST00000530785 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
LTBP3-217ENST00000530785 PXDNLA1KZ92 1463 aa23.25■■□□□ 1.31
LTBP3-217ENST00000530785 KIAA2012Q0VF49 1180 aa23.25■■□□□ 1.31
LTBP3-217ENST00000530785 PRPF40AO75400 957 aaKnown RBP23.24■■□□□ 1.31
LTBP3-217ENST00000530785 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.319e-7■■□□□ 13.9
LTBP3-217ENST00000530785 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
LTBP3-217ENST00000530785 ZNF710Q8N1W2 664 aa23.24■■□□□ 1.31
LTBP3-217ENST00000530785 CWC22Q9HCG8 908 aaKnown RBP23.24■■□□□ 1.31
LTBP3-217ENST00000530785 PKP1Q13835 747 aa23.24■■□□□ 1.31
LTBP3-217ENST00000530785 TMEM63CQ9P1W3 806 aa23.24■■□□□ 1.31
LTBP3-217ENST00000530785 KIF20AO95235 890 aa23.23■■□□□ 1.31
LTBP3-217ENST00000530785 GNAI3P08754 354 aa23.23■■□□□ 1.31
LTBP3-217ENST00000530785 PRIMPOLQ96LW4 560 aa23.23■■□□□ 1.31
LTBP3-217ENST00000530785 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
LTBP3-217ENST00000530785 PXDNQ92626 1479 aa23.23■■□□□ 1.31
LTBP3-217ENST00000530785 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
LTBP3-217ENST00000530785 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
LTBP3-217ENST00000530785 PHAXQ9H814 394 aaKnown RBP23.22■■□□□ 1.31
LTBP3-217ENST00000530785 KIF1AQ12756 1690 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
LTBP3-217ENST00000530785 SDSP20132 328 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 C1orf167Q5SNV9 1468 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 SYCE3A1L190 88 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 EXOC6BQ9Y2D4 811 aa23.21■■□□□ 1.31
LTBP3-217ENST00000530785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.2■■□□□ 1.3
LTBP3-217ENST00000530785 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
LTBP3-217ENST00000530785 PNMA6EA0A0J9YXQ4 647 aa23.2■■□□□ 1.3
LTBP3-217ENST00000530785 HMGN5P82970 282 aaKnown RBP23.2■■□□□ 1.3
LTBP3-217ENST00000530785 PLEKHO1Q53GL0 409 aaPredicted RBP23.2■■□□□ 1.3
LTBP3-217ENST00000530785 ANKRD24Q8TF21 1146 aa23.2■■□□□ 1.3
LTBP3-217ENST00000530785 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
LTBP3-217ENST00000530785 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
LTBP3-217ENST00000530785 KCNQ3O43525 872 aa23.19■■□□□ 1.3
LTBP3-217ENST00000530785 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
LTBP3-217ENST00000530785 ZDHHC9Q9Y397 364 aa23.19■■□□□ 1.3
LTBP3-217ENST00000530785 TEFQ10587 303 aa23.18■■□□□ 1.3
LTBP3-217ENST00000530785 LRRFIP2Q9Y608 721 aaKnown RBP23.18■■□□□ 1.3
LTBP3-217ENST00000530785 LETM1O95202 739 aaPredicted RBP23.18■■□□□ 1.3
LTBP3-217ENST00000530785 ATF3P18847 181 aa23.18■■□□□ 1.3
LTBP3-217ENST00000530785 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
LTBP3-217ENST00000530785 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
LTBP3-217ENST00000530785 AMOTQ4VCS5 1084 aa23.17■■□□□ 1.3
LTBP3-217ENST00000530785 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
LTBP3-217ENST00000530785 HOXB7P09629 217 aa23.17■■□□□ 1.3
LTBP3-217ENST00000530785 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
LTBP3-217ENST00000530785 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
LTBP3-217ENST00000530785 PDE1AP54750 535 aa23.16■■□□□ 1.3
LTBP3-217ENST00000530785 OSBPL3Q9H4L5 887 aa23.16■■□□□ 1.3
LTBP3-217ENST00000530785 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
LTBP3-217ENST00000530785 RGPD5Q99666 1765 aa23.16■■□□□ 1.3
LTBP3-217ENST00000530785 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
LTBP3-217ENST00000530785 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
LTBP3-217ENST00000530785 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 MBD3O95983 291 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 PTMAP06454 111 aaKnown RBP23.15■■□□□ 1.3
LTBP3-217ENST00000530785 RNMTO43148 476 aaKnown RBP23.15■■□□□ 1.3
LTBP3-217ENST00000530785 UBTFL1P0CB47 393 aaPredicted RBP23.15■■□□□ 1.3
LTBP3-217ENST00000530785 CBX1P83916 185 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 C1orf141Q5JVX7 400 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 LRRCC1Q9C099 1032 aa23.15■■□□□ 1.3
LTBP3-217ENST00000530785 SALL3Q9BXA9 1300 aa23.14■■□□□ 1.29
LTBP3-217ENST00000530785 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
LTBP3-217ENST00000530785 ATP2B3Q16720 1220 aa23.13■■□□□ 1.29
LTBP3-217ENST00000530785 CASC1Q6TDU7 716 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms