RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	COL18A1	P39060	1754 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	SCN11A	Q9UI33	1791 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	SSH3	Q8TE77	659 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	DNAAF4	Q8WXU2	420 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	HYPK	Q9NX55	129 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	SPG7	Q9UQ90	795 aa		12.58	□□□□□ -0.4
PGAP2-231	ENST00000528216	HSP90AB1	P08238	724 aa	Known RBP	12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	PDE1A	P54750	535 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	CHRNA2	Q15822	529 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	RAPGEF4	Q8WZA2	1011 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	USP44	Q9H0E7	712 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	LGR6	Q9HBX8	967 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	PRDM11	Q9NQV5	511 aa		12.57	□□□□□ -0.4
PGAP2-231	ENST00000528216	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	SDS	P20132	328 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	POLA2	Q14181	598 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	SLK	Q9H2G2	1235 aa	Predicted RBP	12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	TUBGCP6	Q96RT7	1819 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	SALL3	Q9BXA9	1300 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	RGPD5	Q99666	1765 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	MRC1	P22897	1456 aa		12.56	□□□□□ -0.4
PGAP2-231	ENST00000528216	FRAT2	O75474	233 aa	Predicted RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	DDX58	O95786	925 aa	Known RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	TAT	P17735	454 aa	Predicted RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	PKD1L3	Q7Z443	1732 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	PARP4	Q9UKK3	1724 aa	Known RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	ERC2	O15083	957 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	GIGYF1	O75420	1035 aa	Predicted RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	MTX1	Q13505	466 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	BEND3	Q5T5X7	828 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	KIF2C	Q99661	725 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	USP26	Q9BXU7	913 aa		12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	LRRFIP2	Q9Y608	721 aa	Known RBP	12.55	□□□□□ -0.4
PGAP2-231	ENST00000528216	AFF2	P51816	1311 aa		12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216		K7ELQ4	463 aa	Predicted RBP	12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216	MX1	P20591	662 aa		12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216	DDIT3	P35638	169 aa		12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216	MPRIP	Q6WCQ1	1025 aa		12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216	CHPF2	Q9P2E5	772 aa		12.54	□□□□□ -0.4
PGAP2-231	ENST00000528216	DDX11L8	A8MPP1	907 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	KIF1BP	Q96EK5	621 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	BTG4	Q9NY30	223 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	USP21	Q9UK80	565 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	EIF2S2	P20042	333 aa	Known RBP	12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	KSR2	Q6VAB6	950 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	PHAX	Q9H814	394 aa	Known RBP	12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	AXIN2	Q9Y2T1	843 aa		12.53	□□□□□ -0.4
PGAP2-231	ENST00000528216	PNMA6E	A0A0J9YXQ4	647 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	SMARCA5	O60264	1052 aa	Predicted RBP	12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	MCC	P23508	829 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	EVA1C	P58658	441 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	ERC1	Q8IUD2	1116 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	IFNL2	Q8IZJ0	200 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	NECTIN2	Q92692	538 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	ADCY9	O60503	1353 aa		12.52	□□□□□ -0.41
PGAP2-231	ENST00000528216	PI4KAP2	A4QPH2	592 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	ST18	O60284	1047 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	MCM2	P49736	904 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	ANAPC15	P60006	121 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	PI4KAP1	Q8N8J0	262 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	IL17RA	Q96F46	866 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	DCAF5	Q96JK2	942 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	SLC52A2	Q9HAB3	445 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	EXOC6B	Q9Y2D4	811 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	UTY	O14607	1347 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	PHKG2	P15735	406 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	MCM4	P33991	863 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	ZNF772	Q68DY9	489 aa	Predicted RBP	12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	LINS1	Q8NG48	757 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	GBP4	Q96PP9	640 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	STRN4	Q9NRL3	753 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	NLRP2	Q9NX02	1062 aa		12.51	□□□□□ -0.41
PGAP2-231	ENST00000528216	USP42	Q9H9J4	1324 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	HSP90AA1	P07900	732 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	PPP1R42	Q7Z4L9	355 aa		12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	UNC5CL	Q8IV45	518 aa		12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	QTRT2	Q9H974	415 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	RGS17	Q9UGC6	210 aa	Predicted RBP	12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	CCDC9	Q9Y3X0	531 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-231	ENST00000528216	ZNF790	Q6PG37	636 aa		12.49	□□□□□ -0.41
PGAP2-231	ENST00000528216	CWC22	Q9HCG8	908 aa	Known RBP	12.49	□□□□□ -0.41
PGAP2-231	ENST00000528216	ERBB4	Q15303	1308 aa		12.49	□□□□□ -0.41
PGAP2-231	ENST00000528216	TTC41P	Q6P2S7	1318 aa		12.49	□□□□□ -0.41
PGAP2-231	ENST00000528216	KDM6A	O15550	1401 aa	Predicted RBP	12.49	□□□□□ -0.41
PGAP2-231	ENST00000528216	APBB1	O00213	710 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	SRGAP3	O43295	1099 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	KCNQ3	O43525	872 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	LARP1	Q6PKG0	1096 aa	Known RBP	12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	RHPN1	Q8TCX5	695 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	ABCA3	Q99758	1704 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	SURF6	O75683	361 aa	Known RBP	12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	CSB-PGBD3	P0DP91	1061 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	CLEC17A	Q6ZS10	378 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	GPATCH3	Q96I76	525 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	ESYT1	Q9BSJ8	1104 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms