RNA–Protein interactions for RNA: ENST00000527663.5

PPP1CA-205, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 3

Gene PPP1CA, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-205	ENST00000527663	PPM1G	O15355	546 aa	Predicted RBP	13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	PTCD1	O75127	700 aa	Known RBP	13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	DEFB115	Q30KQ5	88 aa		13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	EYA1	Q99502	592 aa		13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	BEGAIN	Q9BUH8	593 aa		13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	ZNF831	Q5JPB2	1677 aa		13.97	□□□□□ -0.17
PPP1CA-205	ENST00000527663	RASSF10	A6NK89	507 aa		13.96	□□□□□ -0.17
PPP1CA-205	ENST00000527663	DDN	O94850	711 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP1CA-205	ENST00000527663	CABP4	P57796	275 aa		13.96	□□□□□ -0.17
PPP1CA-205	ENST00000527663	CFAP44	Q96MT7	982 aa		13.96	□□□□□ -0.17
PPP1CA-205	ENST00000527663	EMILIN1	Q9Y6C2	1016 aa		13.96	□□□□□ -0.17
PPP1CA-205	ENST00000527663	NEUROD1	Q13562	356 aa		13.95	□□□□□ -0.18
PPP1CA-205	ENST00000527663	USPL1	Q5W0Q7	1092 aa		13.95	□□□□□ -0.18
PPP1CA-205	ENST00000527663	SIN3A	Q96ST3	1273 aa		13.95	□□□□□ -0.18
PPP1CA-205	ENST00000527663	TIAM2	Q8IVF5	1701 aa		13.95	□□□□□ -0.18
PPP1CA-205	ENST00000527663	WDR33	Q9C0J8	1336 aa	Known RBP	13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	ITGBL1	O95965	494 aa	Predicted RBP	13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	NFIX	Q14938	502 aa		13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	PDE4DIP	Q5VU43	2346 aa		13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	TAOK3	Q9H2K8	898 aa		13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.94	□□□□□ -0.18
PPP1CA-205	ENST00000527663	WASHC2A	Q641Q2	1341 aa		13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	LTBP3	Q9NS15	1303 aa		13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	COL5A3	P25940	1745 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	SERPINB2	P05120	415 aa		13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	INTS5	Q6P9B9	1019 aa	Known RBP	13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	TESK2	Q96S53	571 aa		13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	ABT1	Q9ULW3	272 aa	Known RBP	13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	PDZRN3	Q9UPQ7	1066 aa		13.93	□□□□□ -0.18
PPP1CA-205	ENST00000527663	C21orf2	O43822	256 aa		13.92	□□□□□ -0.18
PPP1CA-205	ENST00000527663	EAPP	Q56P03	285 aa	Predicted RBP	13.92	□□□□□ -0.18
PPP1CA-205	ENST00000527663	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PPP1CA-205	ENST00000527663	MYH14	Q7Z406	1995 aa	Known RBP	13.91	□□□□□ -0.18
PPP1CA-205	ENST00000527663	NARF	Q9UHQ1	456 aa		13.91	□□□□□ -0.18
PPP1CA-205	ENST00000527663	CLEC11A	Q9Y240	323 aa		13.91	□□□□□ -0.18
PPP1CA-205	ENST00000527663	ECE1	P42892	770 aa		13.9	□□□□□ -0.18
PPP1CA-205	ENST00000527663	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.9	□□□□□ -0.18
PPP1CA-205	ENST00000527663	SOS1	Q07889	1333 aa	Predicted RBP	13.9	□□□□□ -0.19
PPP1CA-205	ENST00000527663	ST20-MTHFS	A0A0A6YYL1	179 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	PDE6B	P35913	854 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	MTHFS	P49914	203 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	SOGA3	Q5TF21	947 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	PNMA8A	Q86V59	439 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CNTROB	Q8N137	903 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	HACL1	Q9UJ83	578 aa		13.89	□□□□□ -0.19
PPP1CA-205	ENST00000527663	AMOT	Q4VCS5	1084 aa		13.88	□□□□□ -0.19
PPP1CA-205	ENST00000527663	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP1CA-205	ENST00000527663	NFATC2IP	Q8NCF5	419 aa		13.88	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CARMIL3	Q8ND23	1372 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	EPHX2	P34913	555 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	C1orf141	Q5JVX7	400 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CAPNS2	Q96L46	248 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	GPR101	Q96P66	508 aa	Predicted RBP	13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	BRIP1	Q9BX63	1249 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	MCOLN1	Q9GZU1	580 aa		13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	VIRMA	Q69YN4	1812 aa	Known RBP	13.87	□□□□□ -0.19
PPP1CA-205	ENST00000527663	COL15A1	P39059	1388 aa		13.86	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CA12	O43570	354 aa		13.86	□□□□□ -0.19
PPP1CA-205	ENST00000527663	MAP1S	Q66K74	1059 aa	Predicted RBP	13.86	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CNKSR1	Q969H4	720 aa		13.86	□□□□□ -0.19
PPP1CA-205	ENST00000527663	DLEC1	Q9Y238	1755 aa		13.86	□□□□□ -0.19
PPP1CA-205	ENST00000527663	TNRC18	O15417	2968 aa	Predicted RBP	13.85	□□□□□ -0.19
PPP1CA-205	ENST00000527663	EIF4A2	Q14240	407 aa	Known RBP	13.85	□□□□□ -0.19
PPP1CA-205	ENST00000527663	DNAJC10	Q8IXB1	793 aa		13.85	□□□□□ -0.19
PPP1CA-205	ENST00000527663	BCL2L12	Q9HB09	334 aa		13.85	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CYP19A1	P11511	503 aa	Predicted RBP	13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	GRM1	Q13255	1194 aa		13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	BICDL1	Q6ZP65	573 aa		13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	CCDC88A	Q3V6T2	1871 aa		13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	NRXN2	Q9P2S2	1712 aa		13.84	□□□□□ -0.19
PPP1CA-205	ENST00000527663	MAP2K2	P36507	400 aa		13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	CDCA8	Q53HL2	280 aa		13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	PRPF38B	Q5VTL8	546 aa	Known RBP	13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	PRPF40B	Q6NWY9	871 aa	Known RBP	13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	POLK	Q9UBT6	870 aa		13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	TSKS	Q9UJT2	592 aa		13.83	□□□□□ -0.2
PPP1CA-205	ENST00000527663	NPHP1	O15259	732 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	DGKZ	Q13574	1117 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	STYK1	Q6J9G0	422 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	CYP4F22	Q6NT55	531 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	ZBTB1	Q9Y2K1	713 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	SCN4A	P35499	1836 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	DICER1	Q9UPY3	1922 aa	Known RBP	13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	ADAMTS7	Q9UKP4	1686 aa		13.82	□□□□□ -0.2
PPP1CA-205	ENST00000527663	CCDC93	Q567U6	631 aa		13.81	□□□□□ -0.2
PPP1CA-205	ENST00000527663	RNF123	Q5XPI4	1314 aa		13.81	□□□□□ -0.2
PPP1CA-205	ENST00000527663	ZNF541	Q9H0D2	1346 aa		13.81	□□□□□ -0.2
PPP1CA-205	ENST00000527663	AFDN	P55196	1824 aa	Known RBP	13.8	□□□□□ -0.2
PPP1CA-205	ENST00000527663		A0A087WZG4	1122 aa		13.8	□□□□□ -0.2
PPP1CA-205	ENST00000527663	PRR5L	Q6MZQ0	368 aa		13.8	□□□□□ -0.2
PPP1CA-205	ENST00000527663	CARD14	Q9BXL6	1004 aa		13.8	□□□□□ -0.2
PPP1CA-205	ENST00000527663	FER1L6	Q2WGJ9	1857 aa		13.8	□□□□□ -0.2
PPP1CA-205	ENST00000527663	TJP1	Q07157	1748 aa		13.79	□□□□□ -0.2
PPP1CA-205	ENST00000527663	KIF20B	Q96Q89	1820 aa		13.79	□□□□□ -0.2
PPP1CA-205	ENST00000527663	SRGN	P10124	158 aa		13.79	□□□□□ -0.2
PPP1CA-205	ENST00000527663	TBC1D9B	Q66K14	1250 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms