RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 NFIXQ14938 502 aa20.45■□□□□ 0.86
PACS1-203ENST00000524815 POTECB2RU33 542 aa20.44■□□□□ 0.86
PACS1-203ENST00000524815 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
PACS1-203ENST00000524815 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
PACS1-203ENST00000524815 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
PACS1-203ENST00000524815 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
PACS1-203ENST00000524815 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
PACS1-203ENST00000524815 NFKBIEO00221 500 aa20.42■□□□□ 0.86
PACS1-203ENST00000524815 TTLL6Q8N841 843 aa20.42■□□□□ 0.86
PACS1-203ENST00000524815 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
PACS1-203ENST00000524815 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
PACS1-203ENST00000524815 SERPINB2P05120 415 aa20.41■□□□□ 0.86
PACS1-203ENST00000524815 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
PACS1-203ENST00000524815 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
PACS1-203ENST00000524815 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
PACS1-203ENST00000524815 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
PACS1-203ENST00000524815 DLEC1Q9Y238 1755 aa20.39■□□□□ 0.86
PACS1-203ENST00000524815 PANK3Q9H999 370 aa20.39■□□□□ 0.85
PACS1-203ENST00000524815 ZBTB1Q9Y2K1 713 aa20.39■□□□□ 0.85
PACS1-203ENST00000524815 COL15A1P39059 1388 aa20.38■□□□□ 0.85
PACS1-203ENST00000524815 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
PACS1-203ENST00000524815 IL13P35225 146 aa20.38■□□□□ 0.85
PACS1-203ENST00000524815 SLC39A6Q13433 755 aa20.38■□□□□ 0.85
PACS1-203ENST00000524815 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
PACS1-203ENST00000524815 TIAM2Q8IVF5 1701 aa20.37■□□□□ 0.85
PACS1-203ENST00000524815 H0YIN7 160 aa20.36■□□□□ 0.85
PACS1-203ENST00000524815 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
PACS1-203ENST00000524815 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
PACS1-203ENST00000524815 DPY19L2Q6NUT2 758 aa20.34■□□□□ 0.85
PACS1-203ENST00000524815 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
PACS1-203ENST00000524815 MRC1P22897 1456 aa20.34■□□□□ 0.85
PACS1-203ENST00000524815 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
PACS1-203ENST00000524815 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
PACS1-203ENST00000524815 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
PACS1-203ENST00000524815 CREBZFQ9NS37 354 aa20.32■□□□□ 0.84
PACS1-203ENST00000524815 C21orf2O43822 256 aa20.31■□□□□ 0.84
PACS1-203ENST00000524815 ERFEQ4G0M1 354 aa20.31■□□□□ 0.84
PACS1-203ENST00000524815 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
PACS1-203ENST00000524815 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
PACS1-203ENST00000524815 POTEIP0CG38 1075 aa20.3■□□□□ 0.84
PACS1-203ENST00000524815 POTEJP0CG39 1038 aa20.3■□□□□ 0.84
PACS1-203ENST00000524815 EIF5P55010 431 aaKnown RBP20.3■□□□□ 0.84
PACS1-203ENST00000524815 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
PACS1-203ENST00000524815 CHADLQ6NUI6 762 aa20.3■□□□□ 0.84
PACS1-203ENST00000524815 ZNF622Q969S3 477 aaKnown RBP eCLIP20.3■□□□□ 0.84
PACS1-203ENST00000524815 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
PACS1-203ENST00000524815 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
PACS1-203ENST00000524815 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
PACS1-203ENST00000524815 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
PACS1-203ENST00000524815 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
PACS1-203ENST00000524815 DDNO94850 711 aaPredicted RBP20.27■□□□□ 0.84
PACS1-203ENST00000524815 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.84
PACS1-203ENST00000524815 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
PACS1-203ENST00000524815 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
PACS1-203ENST00000524815 DICER1Q9UPY3 1922 aaKnown RBP20.27■□□□□ 0.84
PACS1-203ENST00000524815 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.83
PACS1-203ENST00000524815 FOXN1O15353 648 aa20.26■□□□□ 0.83
PACS1-203ENST00000524815 HMOX1P09601 288 aa20.26■□□□□ 0.83
PACS1-203ENST00000524815 PDE6BP35913 854 aa20.26■□□□□ 0.83
PACS1-203ENST00000524815 A0A087WZG4 1122 aa20.25■□□□□ 0.83
PACS1-203ENST00000524815 COL11A2P13942 1736 aaPredicted RBP20.24■□□□□ 0.83
PACS1-203ENST00000524815 CNTNAP1P78357 1384 aa20.24■□□□□ 0.83
PACS1-203ENST00000524815 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
PACS1-203ENST00000524815 STARD3NLO95772 234 aa20.24■□□□□ 0.83
PACS1-203ENST00000524815 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
PACS1-203ENST00000524815 TAOK3Q9H2K8 898 aa20.24■□□□□ 0.83
PACS1-203ENST00000524815 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
PACS1-203ENST00000524815 TBC1D2BQ9UPU7 963 aa20.23■□□□□ 0.83
PACS1-203ENST00000524815 PASKQ96RG2 1323 aa20.23■□□□□ 0.83
PACS1-203ENST00000524815 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
PACS1-203ENST00000524815 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
PACS1-203ENST00000524815 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
PACS1-203ENST00000524815 ZNF496Q96IT1 587 aaPredicted RBP20.21■□□□□ 0.83
PACS1-203ENST00000524815 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
PACS1-203ENST00000524815 SRGNP10124 158 aa20.2■□□□□ 0.82
PACS1-203ENST00000524815 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
PACS1-203ENST00000524815 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
PACS1-203ENST00000524815 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
PACS1-203ENST00000524815 CNKSR1Q969H4 720 aa20.2■□□□□ 0.82
PACS1-203ENST00000524815 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
PACS1-203ENST00000524815 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
PACS1-203ENST00000524815 VEGFBP49765 207 aa20.19■□□□□ 0.82
PACS1-203ENST00000524815 PRPF40BQ6NWY9 871 aaKnown RBP20.19■□□□□ 0.82
PACS1-203ENST00000524815 LDHDQ86WU2 507 aa20.19■□□□□ 0.82
PACS1-203ENST00000524815 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
PACS1-203ENST00000524815 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
PACS1-203ENST00000524815 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
PACS1-203ENST00000524815 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
PACS1-203ENST00000524815 CAMTA2O94983 1202 aa20.18■□□□□ 0.82
PACS1-203ENST00000524815 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
PACS1-203ENST00000524815 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
PACS1-203ENST00000524815 C7orf43Q8WVR3 580 aa20.18■□□□□ 0.82
PACS1-203ENST00000524815 SETDB2Q96T68 719 aa20.18■□□□□ 0.82
PACS1-203ENST00000524815 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
PACS1-203ENST00000524815 A1BGP04217 495 aa20.17■□□□□ 0.82
PACS1-203ENST00000524815 CTCFP49711 727 aaPredicted RBP20.17■□□□□ 0.82
PACS1-203ENST00000524815 SOGA3Q5TF21 947 aa20.17■□□□□ 0.82
PACS1-203ENST00000524815 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
PACS1-203ENST00000524815 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
PACS1-203ENST00000524815 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms