RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 EGFL7Q9UHF1 273 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 C21orf2O43822 256 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 AVPP01185 164 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 SCNN1AP37088 669 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 SF3B2Q13435 895 aaKnown RBP6.8□□□□□ -1.32
SKP1-212ENST00000523966 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 GLYCTKQ8IVS8 523 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 L3MBTL2Q969R5 705 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 AIDAQ96BJ3 306 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 PURBQ96QR8 312 aaKnown RBP6.8□□□□□ -1.32
SKP1-212ENST00000523966 C2orf49Q9BVC5 232 aaPredicted RBP6.8□□□□□ -1.32
SKP1-212ENST00000523966 FHDC1Q9C0D6 1143 aaPredicted RBP6.8□□□□□ -1.32
SKP1-212ENST00000523966 GRIP2Q9C0E4 1043 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
SKP1-212ENST00000523966 SOWAHDA6NJG2 315 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 TTLL8A6PVC2 850 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
SKP1-212ENST00000523966 NBPF1Q3BBV0 1214 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 LYSMD3Q7Z3D4 306 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 PRICKLE2Q7Z3G6 844 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 IQSEC3Q9UPP2 1182 aaPredicted RBP6.79□□□□□ -1.32
SKP1-212ENST00000523966 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
SKP1-212ENST00000523966 H3BRB1 525 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 TATP17735 454 aaPredicted RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 PHKA2P46019 1235 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 PLA2G4AP47712 749 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 AAMPQ13685 434 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 TUT1Q9H6E5 874 aaKnown RBP6.78□□□□□ -1.32
SKP1-212ENST00000523966 NEUROD4Q9HD90 331 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 PARP3Q9Y6F1 533 aa6.78□□□□□ -1.32
SKP1-212ENST00000523966 ICMTO60725 284 aa6.77□□□□□ -1.33
SKP1-212ENST00000523966 FAM13AO94988 1023 aa6.77□□□□□ -1.33
SKP1-212ENST00000523966 POU4F2Q12837 409 aa6.77□□□□□ -1.33
SKP1-212ENST00000523966 HELQQ8TDG4 1101 aa6.77□□□□□ -1.33
SKP1-212ENST00000523966 USP3Q9Y6I4 520 aa6.77□□□□□ -1.33
SKP1-212ENST00000523966 FIGNL2A6NMB9 653 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 SPATA31C2B4DYI2 1134 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 EML1O00423 815 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 BMP1P13497 986 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 HIF1AQ16665 826 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 C1orf53Q5VUE5 145 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 BICDL1Q6ZP65 573 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 CAPN12Q6ZSI9 719 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 ALDH16A1Q8IZ83 802 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 PHACTR1Q9C0D0 580 aa6.76□□□□□ -1.33
SKP1-212ENST00000523966 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
SKP1-212ENST00000523966 BRD2P25440 801 aaKnown RBP6.75□□□□□ -1.33
SKP1-212ENST00000523966 HIRAP54198 1017 aaPredicted RBP6.75□□□□□ -1.33
SKP1-212ENST00000523966 RTN1Q16799 776 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 WDR44Q5JSH3 913 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 FOXD4L5Q5VV16 416 aaPredicted RBP6.75□□□□□ -1.33
SKP1-212ENST00000523966 ALKBH2Q6NS38 261 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 NBPF10Q6P3W6 841 aaKnown RBP6.75□□□□□ -1.33
SKP1-212ENST00000523966 ABTB2Q8N961 1025 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 RNF217Q8TC41 542 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 RHPN1Q8TCX5 695 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 ZFP42Q96MM3 310 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 IRX2Q9BZI1 471 aaPredicted RBP6.75□□□□□ -1.33
SKP1-212ENST00000523966 TIMMDC1Q9NPL8 285 aa6.75□□□□□ -1.33
SKP1-212ENST00000523966 MAN1A2O60476 641 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 MARSP56192 900 aaKnown RBP6.74□□□□□ -1.33
SKP1-212ENST00000523966 NOM1Q5C9Z4 860 aaKnown RBP6.74□□□□□ -1.33
SKP1-212ENST00000523966 COX20Q5RI15 118 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 MYO19Q96H55 970 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 STIM2Q9P246 746 aa6.74□□□□□ -1.33
SKP1-212ENST00000523966 SOS2Q07890 1332 aaPredicted RBP6.74□□□□□ -1.33
SKP1-212ENST00000523966 A0A1B0GTH6 734 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 RHOQP17081 205 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 DGKZQ13574 1117 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 MTMR3Q13615 1198 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.73□□□□□ -1.337e-8■■■■■ 40
SKP1-212ENST00000523966 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
SKP1-212ENST00000523966 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 TTC16Q8NEE8 873 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 QTRT2Q9H974 415 aaKnown RBP6.73□□□□□ -1.33
SKP1-212ENST00000523966 ANKIB1Q9P2G1 1089 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
SKP1-212ENST00000523966 POTEAQ6S8J7 498 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 PGBD3Q8N328 593 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 IFT43Q96FT9 208 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 SENP2Q9HC62 589 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 ATP13A2Q9NQ11 1180 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
SKP1-212ENST00000523966 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
SKP1-212ENST00000523966 NDUFB5O43674 189 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 PCSK2P16519 638 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 ERCC3P19447 782 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms