RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
SKP1-208ENST00000521216 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
SKP1-208ENST00000521216 SSFA2P28290 1259 aa9.49□□□□□ -0.89
SKP1-208ENST00000521216 PSMA6P60900 246 aaKnown RBP9.49□□□□□ -0.89
SKP1-208ENST00000521216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.49□□□□□ -0.897e-8■■■■■ 40
SKP1-208ENST00000521216 C4orf17Q53FE4 359 aa9.49□□□□□ -0.89
SKP1-208ENST00000521216 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
SKP1-208ENST00000521216 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
SKP1-208ENST00000521216 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
SKP1-208ENST00000521216 CXXC1Q9P0U4 656 aaPredicted RBP9.49□□□□□ -0.89
SKP1-208ENST00000521216 NOS2P35228 1153 aa9.48□□□□□ -0.89
SKP1-208ENST00000521216 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
SKP1-208ENST00000521216 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
SKP1-208ENST00000521216 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
SKP1-208ENST00000521216 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
SKP1-208ENST00000521216 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
SKP1-208ENST00000521216 SNRPBP14678 240 aaKnown RBP9.47□□□□□ -0.89
SKP1-208ENST00000521216 SCNN1AP37088 669 aa9.47□□□□□ -0.89
SKP1-208ENST00000521216 SH3PXD2AQ5TCZ1 1133 aa9.47□□□□□ -0.89
SKP1-208ENST00000521216 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
SKP1-208ENST00000521216 TIMMDC1Q9NPL8 285 aa9.47□□□□□ -0.89
SKP1-208ENST00000521216 TEAD4Q15561 434 aa9.46□□□□□ -0.9
SKP1-208ENST00000521216 ZDHHC1Q8WTX9 485 aa9.46□□□□□ -0.9
SKP1-208ENST00000521216 POTECB2RU33 542 aa9.45□□□□□ -0.9
SKP1-208ENST00000521216 FOXO3O43524 673 aa9.45□□□□□ -0.9
SKP1-208ENST00000521216 BRD1O95696 1058 aa9.45□□□□□ -0.9
SKP1-208ENST00000521216 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
SKP1-208ENST00000521216 C2orf49Q9BVC5 232 aaPredicted RBP9.45□□□□□ -0.9
SKP1-208ENST00000521216 EML1O00423 815 aa9.44□□□□□ -0.9
SKP1-208ENST00000521216 NAA30Q147X3 362 aaPredicted RBP9.44□□□□□ -0.9
SKP1-208ENST00000521216 NBPF1Q3BBV0 1214 aa9.44□□□□□ -0.9
SKP1-208ENST00000521216 CAPN12Q6ZSI9 719 aa9.44□□□□□ -0.9
SKP1-208ENST00000521216 GAS2L1Q99501 681 aaPredicted RBP9.44□□□□□ -0.9
SKP1-208ENST00000521216 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
SKP1-208ENST00000521216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■■■ 36.6
SKP1-208ENST00000521216 TXLNAP40222 546 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 PTSQ03393 145 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 SEPT3Q9UH03 358 aa9.42□□□□□ -0.9
SKP1-208ENST00000521216 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
SKP1-208ENST00000521216 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
SKP1-208ENST00000521216 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
SKP1-208ENST00000521216 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
SKP1-208ENST00000521216 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
SKP1-208ENST00000521216 C1orf216Q8TAB5 229 aa9.41□□□□□ -0.9
SKP1-208ENST00000521216 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
SKP1-208ENST00000521216 A0A1B0GTH6 734 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 ABL1P00519 1130 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 MSX1P28360 303 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 ARSJQ5FYB0 599 aaPredicted RBP9.4□□□□□ -0.9
SKP1-208ENST00000521216 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 MTMR7Q9Y216 660 aa9.4□□□□□ -0.9
SKP1-208ENST00000521216 DYRK1BQ9Y463 629 aa9.39□□□□□ -0.91
SKP1-208ENST00000521216 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 CCDC155Q8N6L0 562 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
SKP1-208ENST00000521216 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 NEUROD4Q9HD90 331 aa9.38□□□□□ -0.91
SKP1-208ENST00000521216 F11P03951 625 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
SKP1-208ENST00000521216 KCNA1Q09470 495 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 SAP130Q9H0E3 1048 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
SKP1-208ENST00000521216 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 IVNS1ABPQ9Y6Y0 642 aa9.37□□□□□ -0.91
SKP1-208ENST00000521216 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
SKP1-208ENST00000521216 SERPINB4P48594 390 aa9.36□□□□□ -0.91
SKP1-208ENST00000521216 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
SKP1-208ENST00000521216 POTEAQ6S8J7 498 aa9.36□□□□□ -0.91
SKP1-208ENST00000521216 GTF3C2Q8WUA4 911 aaPredicted RBP9.36□□□□□ -0.91
SKP1-208ENST00000521216 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
SKP1-208ENST00000521216 ATP4AP20648 1035 aa9.35□□□□□ -0.91
SKP1-208ENST00000521216 DGKZQ13574 1117 aa9.35□□□□□ -0.91
SKP1-208ENST00000521216 RTN1Q16799 776 aa9.35□□□□□ -0.91
SKP1-208ENST00000521216 COX20Q5RI15 118 aa9.35□□□□□ -0.91
SKP1-208ENST00000521216 KLK14Q9P0G3 267 aa9.35□□□□□ -0.91
SKP1-208ENST00000521216 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
SKP1-208ENST00000521216 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
SKP1-208ENST00000521216 ZNF211Q13398 564 aaPredicted RBP9.34□□□□□ -0.91
SKP1-208ENST00000521216 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
SKP1-208ENST00000521216 A0A1W2PNR3 127 aa9.33□□□□□ -0.92
SKP1-208ENST00000521216 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
SKP1-208ENST00000521216 LRRC69Q6ZNQ3 347 aa9.33□□□□□ -0.92
SKP1-208ENST00000521216 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
SKP1-208ENST00000521216 LRFN2Q9ULH4 789 aa9.33□□□□□ -0.92
SKP1-208ENST00000521216 DNMT3AQ9Y6K1 912 aaPredicted RBP9.33□□□□□ -0.92
SKP1-208ENST00000521216 VEGFBP49765 207 aa9.32□□□□□ -0.92
SKP1-208ENST00000521216 C11orf91Q3C1V1 193 aa9.32□□□□□ -0.92
SKP1-208ENST00000521216 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
SKP1-208ENST00000521216 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
SKP1-208ENST00000521216 HSH2DQ96JZ2 352 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms